RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 MPV17L2Q567V2 206 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 RNASE13Q5GAN3 156 aaKnown RBP1.25□□□□□ -2.21
CPSF3-205ENST00000489629 KDM4DQ6B0I6 523 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 SLC25A25Q6KCM7 469 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 ZFP1Q6P2D0 407 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 C16orf87Q6PH81 154 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 ULK3Q6PHR2 472 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 ANGPTL8Q6UXH0 198 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 WDR82Q6UXN9 313 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 OSR2Q8N2R0 312 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 ZNF645Q8N7E2 425 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 SNX31Q8N9S9 440 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 OR10G6Q8NH81 332 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 LINC01560Q8TB33 94 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 ZCCHC13Q8WW36 166 aaKnown RBP1.25□□□□□ -2.21
CPSF3-205ENST00000489629 BTN2A3PQ96KV6 586 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 FAM19A4Q96LR4 140 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 C18orf15Q96N68 181 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 SCGB3A2Q96PL1 93 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 FGF23Q9GZV9 251 aaPredicted RBP1.25□□□□□ -2.21
CPSF3-205ENST00000489629 C1orf198Q9H425 327 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 MYOZ1Q9NP98 299 aaPredicted RBP1.25□□□□□ -2.21
CPSF3-205ENST00000489629 CHRAC1Q9NRG0 131 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 RBFOX1Q9NWB1 397 aaKnown RBP1.25□□□□□ -2.21
CPSF3-205ENST00000489629 ZNF257Q9Y2Q1 563 aa1.25□□□□□ -2.21
CPSF3-205ENST00000489629 IGLV3-12A0A075B6K2 115 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 TRAV6A0A075B6T7 132 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 IGHV3-72A0A0B4J1Y9 119 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 A0A0B4J2E0 115 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 ZNF850A8MQ14 1090 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 SYCE1LA8MT33 242 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 H3BN98 237 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 K7EN84 100 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 RRP8O43159 456 aaKnown RBP1.24□□□□□ -2.21
CPSF3-205ENST00000489629 CHST10O43529 356 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 XRCC2O43543 280 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 CTNSO60931 367 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 SERPINB7O75635 380 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 IGLV3-25P01717 112 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 IGHV3-11P01762 117 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 GLAP06280 429 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 ZNF688P0C7X2 276 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 THRAP10827 490 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 MSR1P21757 451 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 ME2P23368 584 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 GGT2P36268 569 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 TAS2R31P59538 309 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 TAS2R46P59540 309 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 CYP24A1Q07973 514 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 SIGLEC14Q08ET2 396 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 IGFBP7Q16270 282 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 C5orf64Q2M2E5 130 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 HNRNPA1L2Q32P51 320 aaKnown RBP1.24□□□□□ -2.21
CPSF3-205ENST00000489629 C6orf183Q5T699 404 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 MLIPQ5VWP3 458 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 AP1ARQ63HQ0 302 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 UNC93AQ86WB7 457 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 RAB43Q86YS6 212 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 CSGALNACT2Q8N6G5 542 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 WDR31Q8NA23 367 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 GATSQ8NAP1 163 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 TMEM104Q8NE00 496 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 OR5T3Q8NGG3 340 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 ITFG1Q8TB96 612 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 OR8D1Q8WZ84 308 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 SLC25A46Q96AG3 418 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 TMIGD2Q96BF3 282 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 HAUS1Q96CS2 278 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 LRRC39Q96DD0 335 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 KCNS1Q96KK3 526 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 RNF157Q96PX1 679 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 DOK1Q99704 481 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 RBBP8Q99708 897 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 GABRG3Q99928 467 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 TIMM29Q9BSF4 260 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 RSG1Q9BU20 258 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 GGTLC1Q9BX51 225 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 RRAGDQ9NQL2 400 aaPredicted RBP1.24□□□□□ -2.21
CPSF3-205ENST00000489629 ZC4H2Q9NQZ6 224 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 DYRK4Q9NR20 520 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 RGS18Q9NS28 235 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 MCUBQ9NWR8 336 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 S4R3C0 116 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 FCGBPQ9Y6R7 5405 aaPredicted RBP1.24□□□□□ -2.21
CPSF3-205ENST00000489629 NLRC5Q86WI3 1866 aa1.24□□□□□ -2.21
CPSF3-205ENST00000489629 YEATS2Q9ULM3 1422 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 SVILO95425 2214 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 IGHV7-4-1A0A0J9YVY3 117 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 CENPVL3A0A0U1RRI6 287 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 NDUFC2-KCTD14E9PQ53 114 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 TNFRSF11BO00300 401 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 TAAR5O14804 337 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 RAD1O60671 282 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 HSBP1O75506 76 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 ETHE1O95571 254 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 PTTG1O95997 202 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 HLA-DQB1P01920 261 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 PTNP21246 168 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 HTR1DP28221 377 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 LCN1P31025 176 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms