RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 GALR1P47211 349 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 KCNJ3P48549 501 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 KDSRQ06136 332 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 LOXL1Q08397 574 aaPredicted RBP2.74□□□□□ -1.97
XRN1-213ENST00000489241 DEFB116Q30KQ4 102 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 FAM27D1Q5T7N8 215 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 KDM4DQ6B0I6 523 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 IGFL2Q6UWQ7 119 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 RTL4Q6ZR62 310 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 PGAM4Q8N0Y7 254 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 OR6N1Q8NGY5 312 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 OR52P1PQ8NH57 321 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 COQ8AQ8NI60 647 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 RXFP4Q8TDU9 374 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 ATP6V1G3Q96LB4 118 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 SULT4A1Q9BR01 284 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 SLC25A39Q9BZJ4 359 aaPredicted RBP2.74□□□□□ -1.97
XRN1-213ENST00000489241 TOLLIPQ9H0E2 274 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 DDX19AQ9NUU7 478 aaKnown RBP2.74□□□□□ -1.97
XRN1-213ENST00000489241 RMND1Q9NWS8 449 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 VAX2Q9UIW0 290 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 ZNF223Q9UK11 482 aaPredicted RBP2.74□□□□□ -1.97
XRN1-213ENST00000489241 ZNF222Q9UK12 451 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 TBX21Q9UL17 535 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 PSG11Q9UQ72 335 aa2.74□□□□□ -1.97
XRN1-213ENST00000489241 MTCL1Q9Y4B5 1905 aaKnown RBP2.74□□□□□ -1.97
XRN1-213ENST00000489241 IGKV6D-21A0A0A0MT36 114 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 MGAT4DA6NG13 374 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 GOLGA8JA6NMD2 632 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 NDUFC2-KCTD14E9PQ53 114 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 TNFRSF11BO00300 401 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 RAD51BO15315 384 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 SOCS1O15524 211 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 GATCO43716 136 aaKnown RBP2.73□□□□□ -1.97
XRN1-213ENST00000489241 UPK1BO75841 260 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 TRBV12-3P01733 135 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 GOLGA8HP0CJ92 632 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 SLC35A1P78382 337 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 CDK5Q00535 292 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 C2orf54Q08AI8 447 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 SYCNQ0VAF6 134 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 STX3Q13277 289 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 SMUG1Q53HV7 270 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 MPV17L2Q567V2 206 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 TMEM236Q5W0B7 351 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 STEAP4Q687X5 459 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 FAHD1Q6P587 224 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 SLC16A13Q7RTY0 426 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 CALHM1Q8IU99 346 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 WDFY1Q8IWB7 410 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 RIMKLAQ8IXN7 391 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 SYCE1Q8N0S2 351 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 OR6K2Q8NGY2 324 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 RERGQ96A58 199 aaPredicted RBP2.73□□□□□ -1.97
XRN1-213ENST00000489241 ZNF488Q96MN9 340 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 C18orf15Q96N68 181 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 SDHCQ99643 169 aaPredicted RBP2.73□□□□□ -1.97
XRN1-213ENST00000489241 C20orf144Q9BQM9 153 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 GGTLC1Q9BX51 225 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 FGF23Q9GZV9 251 aaPredicted RBP2.73□□□□□ -1.97
XRN1-213ENST00000489241 SLC38A10Q9HBR0 1119 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 CHMP5Q9NZZ3 219 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 NXT1Q9UKK6 140 aaKnown RBP2.73□□□□□ -1.97
XRN1-213ENST00000489241 CFL2Q9Y281 166 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 HES2Q9Y543 173 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 CDC42BPBQ9Y5S2 1711 aa2.73□□□□□ -1.97
XRN1-213ENST00000489241 IGLV4-69A0A075B6H9 119 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 GOLGA8QA0A0J9YX86 632 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 RSPH10B2B2RC85 870 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 TAAR5O14804 337 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 POLR3GO15318 223 aaPredicted RBP2.72□□□□□ -1.97
XRN1-213ENST00000489241 SPAG7O75391 227 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 SERPINB7O75635 380 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 GLSO94925 669 aaPredicted RBP2.72□□□□□ -1.97
XRN1-213ENST00000489241 CST4P01036 141 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 SLC35G6P0C7Q6 338 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 RSPH10BP0C881 870 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 CXCR1P25024 350 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 P2RY2P41231 377 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 PRLHRP49683 370 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 MNAT1P51948 309 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 C2orf80Q0P641 193 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 INCA1Q0VD86 236 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 PNOCQ13519 176 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 FAM78AQ5JUQ0 283 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 Q6ZR03 302 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 LINC01551Q86U37 167 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 LRRC8AQ8IWT6 810 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 SLC7A5P1Q8MH63 180 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 CA13Q8N1Q1 262 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 GHSRQ92847 366 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 FLYWCH2Q96CP2 140 aaKnown RBP2.72□□□□□ -1.97
XRN1-213ENST00000489241 KCNS1Q96KK3 526 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 TMEM100Q9NV29 134 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 VAPAQ9P0L0 249 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 ZNRD1Q9P1U0 126 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 NDRG2Q9UN36 371 aaKnown RBP2.72□□□□□ -1.97
XRN1-213ENST00000489241 SIGLEC7Q9Y286 467 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 ACOT9Q9Y305 439 aa2.72□□□□□ -1.97
XRN1-213ENST00000489241 TET2Q6N021 2002 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms