RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TTTY10Q9BZA0 68 aa20.82■□□□□ 0.92
HMGN1-217ENST00000489072 PRRG3Q9BZD7 231 aa20.82■□□□□ 0.92
HMGN1-217ENST00000489072 SEMA6AQ9H2E6 1030 aa20.82■□□□□ 0.92
HMGN1-217ENST00000489072 CLN8Q9UBY8 286 aa20.82■□□□□ 0.92
HMGN1-217ENST00000489072 hCG_1807616A0A1W2PRN6 198 aa20.81■□□□□ 0.92
HMGN1-217ENST00000489072 PHYHO14832 338 aa20.81■□□□□ 0.92
HMGN1-217ENST00000489072 CIB2O75838 187 aa20.81■□□□□ 0.92
HMGN1-217ENST00000489072 CSNK2BP67870 215 aa20.81■□□□□ 0.92
HMGN1-217ENST00000489072 MEPCEQ7L2J0 689 aaKnown RBP20.81■□□□□ 0.92
HMGN1-217ENST00000489072 BPIFB2Q8N4F0 458 aa20.81■□□□□ 0.92
HMGN1-217ENST00000489072 OR1M1Q8NGA1 313 aa20.81■□□□□ 0.92
HMGN1-217ENST00000489072 TMEM163Q8TC26 289 aa20.81■□□□□ 0.92
HMGN1-217ENST00000489072 ITPKCQ96DU7 683 aa20.81■□□□□ 0.92
HMGN1-217ENST00000489072 CIB1Q99828 191 aa20.81■□□□□ 0.92
HMGN1-217ENST00000489072 SUCNR1Q9BXA5 334 aa20.81■□□□□ 0.92
HMGN1-217ENST00000489072 FAM206AQ9NX38 181 aa20.81■□□□□ 0.92
HMGN1-217ENST00000489072 OOEPA6NGQ2 149 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 GNALP38405 381 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 ROM1Q03395 351 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 TUSC1Q2TAM9 212 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 KCTD18Q6PI47 426 aaPredicted RBP20.8■□□□□ 0.92
HMGN1-217ENST00000489072 DEGS2Q6QHC5 323 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 FAM90A1Q86YD7 464 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 ZFAND2BQ8WV99 257 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 OR8B4Q96RC9 309 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 IL4I1Q96RQ9 567 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 CNN2Q99439 309 aaKnown RBP20.8■□□□□ 0.92
HMGN1-217ENST00000489072 ESM1Q9NQ30 184 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 ZNF69Q9UC07 566 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 NUP50Q9UKX7 468 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 OAZ3Q9UMX2 235 aa20.8■□□□□ 0.92
HMGN1-217ENST00000489072 KIR2DS1A0A191URI9 304 aa20.79■□□□□ 0.92
HMGN1-217ENST00000489072 C22orf46C9J442 243 aa20.79■□□□□ 0.92
HMGN1-217ENST00000489072 POLR2IP36954 125 aaKnown RBP20.79■□□□□ 0.92
HMGN1-217ENST00000489072 PRDX4Q13162 271 aa20.79■□□□□ 0.92
HMGN1-217ENST00000489072 KCNJ8Q15842 424 aa20.79■□□□□ 0.92
HMGN1-217ENST00000489072 NXNL2Q5VZ03 156 aa20.79■□□□□ 0.92
HMGN1-217ENST00000489072 BTNL3Q6UXE8 466 aa20.79■□□□□ 0.92
HMGN1-217ENST00000489072 CENPNQ96H22 339 aaPredicted RBP20.79■□□□□ 0.92
HMGN1-217ENST00000489072 NUDT16L1Q9BRJ7 211 aaKnown RBP20.79■□□□□ 0.92
HMGN1-217ENST00000489072 FGF23Q9GZV9 251 aaPredicted RBP20.79■□□□□ 0.92
HMGN1-217ENST00000489072 IGHV3OR15-7A0A075B7D8 119 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 TRAV38-1A0A0B4J264 116 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 ZNF850A8MQ14 1090 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 ADAM20O43506 726 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 FCN3O75636 299 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 CST4P01036 141 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 GYPAP02724 150 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 FPR2P25090 351 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 POU4F2Q12837 409 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 SNCBQ16143 134 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 TEX36Q5VZQ5 186 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 WDR82Q6UXN9 313 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 ZNF679Q8IYX0 411 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 BCL6BQ8N143 479 aaPredicted RBP20.78■□□□□ 0.92
HMGN1-217ENST00000489072 GALNT4Q8N4A0 578 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 LRRC29Q8WV35 223 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 PYDC1Q8WXC3 89 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 ASB17Q8WXJ9 295 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 MROQ9BYG7 248 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 TLNRD1Q9H1K6 362 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 RNPEPL1Q9HAU8 725 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 ADGRL4Q9HBW9 690 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 SMURF1Q9HCE7 757 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 TRIM36Q9NQ86 728 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 ZNF391Q9UJN7 358 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 MPC1Q9Y5U8 109 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 TMEM14AQ9Y6G1 99 aa20.78■□□□□ 0.92
HMGN1-217ENST00000489072 TMEM269A0A1B0GVZ9 245 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 ACOD1A6NK06 481 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 SAC3D1A6NKF1 404 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 PPIAL4GP0DN37 164 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 IL5RAQ01344 420 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 FTMTQ8N4E7 242 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 ZDHHC22Q8N966 263 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 OR5P3Q8WZ94 311 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 PPP1R14AQ96A00 147 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 UPRTQ96BW1 309 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 TECTBQ96PL2 329 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 MICU1Q9BPX6 476 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 H2AFY2Q9P0M6 372 aaPredicted RBP20.77■□□□□ 0.92
HMGN1-217ENST00000489072 ENOPH1Q9UHY7 261 aa20.77■□□□□ 0.92
HMGN1-217ENST00000489072 A0A0U1RQV5 110 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 SLC22A31A6NKX4 558 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 ANXA2P2A6NMY6 339 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-217ENST00000489072 CDIPTO14735 213 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 MAGEB4O15481 346 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-217ENST00000489072 ZNF254O75437 659 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 IGHV4-38-2P0DP08 117 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 DCTDP32321 178 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 NPY4RP50391 375 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 ELF3P78545 371 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-217ENST00000489072 MFGE8Q08431 387 aaPredicted RBP20.76■□□□□ 0.91
HMGN1-217ENST00000489072 SLC35F2Q8IXU6 374 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 SIGLECL1Q8N7X8 197 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 HPSE2Q8WWQ2 592 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 PIGCQ92535 297 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 SEH1LQ96EE3 360 aa20.76■□□□□ 0.91
HMGN1-217ENST00000489072 JMJD8Q96S16 334 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms