RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CEACAM18A8MTB9 384 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 KIAA1324LA8MWY0 1029 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-218ENST00000489037 LOC110117498-PIK3R3F6TDL0 507 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 MTRF1O75570 445 aaKnown RBP11.99□□□□□ -0.49
BRCA1-218ENST00000489037 ATP6V1B1P15313 513 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 THBS2P35442 1172 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 PMELP40967 661 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 HNRNPA0Q13151 305 aaKnown RBP11.99□□□□□ -0.49
BRCA1-218ENST00000489037 YIPF7Q8N8F6 280 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 OR10H4Q8NGA5 316 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 OR8B3Q8NGG8 313 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 PIGCQ92535 297 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 NEIL1Q96FI4 390 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-218ENST00000489037 OR8B2Q96RD0 313 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 TBX5Q99593 518 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 APOL4Q9BPW4 351 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 RTL8AQ9BWD3 113 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 FAM206AQ9NX38 181 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 OR5V1Q9UGF6 321 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 LRCH1Q9Y2L9 728 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 RHBDD3Q9Y3P4 386 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 GMPPBQ9Y5P6 360 aa11.99□□□□□ -0.49
BRCA1-218ENST00000489037 TRAV38-1A0A0B4J264 116 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 MPZL2O60487 215 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 PTBP3O95758 552 aaKnown RBP11.98□□□□□ -0.49
BRCA1-218ENST00000489037 CST4P01036 141 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 WNT2P09544 360 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 RBMXP38159 391 aaKnown RBP11.98□□□□□ -0.49
BRCA1-218ENST00000489037 GNB2P62879 340 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 PRDX4Q13162 271 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 ZNF404Q494X3 552 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 BCL2L15Q5TBC7 163 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 DCDC5Q6ZRR9 648 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 KCTD8Q6ZWB6 473 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 DEFB108BQ8NET1 73 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 SEMA6DQ8NFY4 1073 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 TMEM246Q9BRR3 403 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 SSBP3Q9BWW4 388 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-218ENST00000489037 C7orf69Q9H7B7 122 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 G6PC2Q9NQR9 355 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 NUFIP1Q9UHK0 495 aaKnown RBP11.98□□□□□ -0.49
BRCA1-218ENST00000489037 SNX5Q9Y5X3 404 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 R4GMQ9 66 aa11.98□□□□□ -0.49
BRCA1-218ENST00000489037 PPIAL4CA0A0B4J2A2 164 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 ZNF816-ZNF321PA0A0X1KG74 233 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 TMEM210A6NLX4 147 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 ZNF850A8MQ14 1090 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 F5H0A9 414 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-218ENST00000489037 LGALS8O00214 317 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 NDUFA2O43678 99 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 MTNR1AP48039 350 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 SNRPGP62308 76 aaKnown RBP11.97□□□□□ -0.49
BRCA1-218ENST00000489037 RIPPLY1Q0D2K3 151 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 OCLNQ16625 522 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 ZSCAN26Q16670 478 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 FAM201AQ5SY85 155 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 PLEKHG7Q6ZR37 379 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 FAM220AQ7Z4H9 259 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 ZDHHC23Q8IYP9 409 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 GALNT4Q8N4A0 578 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 ZNF555Q8NEP9 628 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 OR1M1Q8NGA1 313 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 OR51E1Q8TCB6 317 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 RNF170Q96K19 258 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 FAM71F1Q96KD3 344 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-218ENST00000489037 LYZL4Q96KX0 146 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 Q96MT0 163 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 MYCBPQ99417 103 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-218ENST00000489037 METTL17Q9H7H0 456 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-218ENST00000489037 RNPEPL1Q9HAU8 725 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 GPR84Q9NQS5 396 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 OR52A1Q9UKL2 312 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 PCDHGB1Q9Y5G3 927 aa11.97□□□□□ -0.49
BRCA1-218ENST00000489037 A0A1W2PQL4 384 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-218ENST00000489037 OOEPA6NGQ2 149 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 METTL15A6NJ78 407 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 A8MXK9 166 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 PRR32B1ATL7 298 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 ENTPD6O75354 484 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 SULT1C4O75897 302 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 RPP14O95059 124 aaKnown RBP11.96□□□□□ -0.49
BRCA1-218ENST00000489037 APOL3O95236 402 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 ACKR3P25106 362 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 ZFP36P26651 326 aaKnown RBP11.96□□□□□ -0.49
BRCA1-218ENST00000489037 ACTC1P68032 377 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 ACTA1P68133 377 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 SLC25A30Q5SVS4 291 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 ZBTB37Q5TC79 503 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 SFRP4Q6FHJ7 346 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-218ENST00000489037 BTNL3Q6UXE8 466 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 ZNF826PQ6ZT77 177 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 RFLNBQ8N5W9 214 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 NANPQ8TBE9 248 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 UBE2FQ969M7 185 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 MRPL48Q96GC5 212 aaKnown RBP11.96□□□□□ -0.49
BRCA1-218ENST00000489037 SLC29A1Q99808 456 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 MRI1Q9BV20 369 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 ADI1Q9BV57 179 aa11.96□□□□□ -0.49
BRCA1-218ENST00000489037 CLN8Q9UBY8 286 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms