RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 SMURF1Q9HCE7 757 aa9.91□□□□□ -0.82
CCHCR1-215ENST00000488920 TRIM36Q9NQ86 728 aa9.91□□□□□ -0.82
CCHCR1-215ENST00000488920 DNAJB9Q9UBS3 223 aa9.91□□□□□ -0.82
CCHCR1-215ENST00000488920 POMPQ9Y244 141 aa9.91□□□□□ -0.82
CCHCR1-215ENST00000488920 TCRBV3S1A0A5B6 114 aa9.9□□□□□ -0.82
CCHCR1-215ENST00000488920 FCN3O75636 299 aa9.9□□□□□ -0.82
CCHCR1-215ENST00000488920 DNAJC8O75937 253 aaPredicted RBP9.9□□□□□ -0.82
CCHCR1-215ENST00000488920 HOXB6P17509 224 aaKnown RBP9.9□□□□□ -0.82
CCHCR1-215ENST00000488920 GNALP38405 381 aa9.9□□□□□ -0.82
CCHCR1-215ENST00000488920 DEFB112Q30KQ8 113 aa9.9□□□□□ -0.82
CCHCR1-215ENST00000488920 PAPD5Q8NDF8 572 aaKnown RBP9.9□□□□□ -0.82
CCHCR1-215ENST00000488920 SLC25A28Q96A46 364 aa9.9□□□□□ -0.82
CCHCR1-215ENST00000488920 SEH1LQ96EE3 360 aa9.9□□□□□ -0.82
CCHCR1-215ENST00000488920 TVP23BQ9NYZ1 205 aa9.9□□□□□ -0.82
CCHCR1-215ENST00000488920 PCDHGB1Q9Y5G3 927 aa9.9□□□□□ -0.82
CCHCR1-215ENST00000488920 A0A1B0GW55 424 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 ZNF850A8MQ14 1090 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 ZNF879B4DU55 563 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 DVL1O14640 695 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 CDIPTO14735 213 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 TMPRSS2O15393 492 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 PRODHO43272 600 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 TOX4O94842 621 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 LIPFP07098 398 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 RNASE1P07998 156 aaKnown RBP9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 DUX4L2P0CJ85 424 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 DUX4L3P0CJ86 424 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 DUX4L4P0CJ87 422 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 DUX4L5P0CJ88 424 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 DUX4L6P0CJ89 424 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 DUX4L7P0CJ90 424 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 ALOX5APP20292 161 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 SLC2A5P22732 501 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 ACKR3P25106 362 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 CFHR2P36980 270 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 GMFBP60983 142 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 FOXL1Q12952 345 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 APOFQ13790 326 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 SNAPC1Q16533 368 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 MICBQ29980 383 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 SLC35D3Q5M8T2 416 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 GPR157Q5UAW9 335 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 TEX36Q5VZQ5 186 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 RUSC1-AS1Q66K80 236 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 DUX4L9Q6RFH8 374 aaPredicted RBP9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 WDR82Q6UXN9 313 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 BTN2A1Q7KYR7 527 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 FGFRL1Q8N441 504 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 GALNT4Q8N4A0 578 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 CSNK2A3Q8NEV1 391 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 ZDHHC16Q969W1 377 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 LYZL4Q96KX0 146 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 CCL13Q99616 98 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 MICU1Q9BPX6 476 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 TEX12Q9BXU0 123 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 RGCCQ9H4X1 137 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 ZMAT3Q9HA38 289 aaKnown RBP9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 RNPEPL1Q9HAU8 725 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 SLC25A19Q9HC21 320 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 PAPOLBQ9NRJ5 636 aaKnown RBP9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 TNFRSF19Q9NS68 423 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 FAM53CQ9NYF3 392 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 DUX4Q9UBX2 424 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 LAMP5Q9UJQ1 280 aa9.89□□□□□ -0.83
CCHCR1-215ENST00000488920 ANXA2P2A6NMY6 339 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 CLDN34H7C241 214 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 PSMD9O00233 223 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 P2RY10O00398 339 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 GSC2O15499 205 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 HOXA3O43365 443 aaPredicted RBP9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 TIPRLO75663 272 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 MRPL3P09001 348 aaKnown RBP9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 MMP9P14780 707 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 MUC1P15941 1255 aaPredicted RBP9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 DAPP51397 102 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 CRISP1P54107 249 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 ARF6P62330 175 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 IL5RAQ01344 420 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 PRDX4Q13162 271 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 WDR38Q5JTN6 314 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 KCTD8Q6ZWB6 473 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 KRT77Q7Z794 578 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 PNLDC1Q8NA58 520 aaKnown RBP9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 OR5T2Q8NGG2 359 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 OR8B12Q8NGG6 310 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 OR5P3Q8WZ94 311 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 ST8SIA4Q92187 359 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 PIGCQ92535 297 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 RPL3LQ92901 407 aaKnown RBP9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 ITPKCQ96DU7 683 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 NRBF2Q96F24 287 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 RNF170Q96K19 258 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 WDFY2Q96P53 400 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 TBX15Q96SF7 602 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 TEAD3Q99594 435 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 ZNF747Q9BV97 191 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 RTL8AQ9BWD3 113 aa9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 CADM1Q9BY67 442 aaKnown RBP9.88□□□□□ -0.83
CCHCR1-215ENST00000488920 KIF17Q9P2E2 1029 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms