RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 SVILO95425 2214 aa1.58□□□□□ -2.16
PTPN4-212ENST00000488896 FBN3Q75N90 2809 aa1.58□□□□□ -2.16
PTPN4-212ENST00000488896 FHOD3Q2V2M9 1422 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 IGLV10-54A0A075B6I4 117 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 IGHV3OR16-9A0A0B4J2B5 98 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 NME4O00746 187 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 DNALI1O14645 258 aaPredicted RBP1.57□□□□□ -2.16
PTPN4-212ENST00000488896 AQP9O43315 295 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 CCNB2O95067 398 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 FSTL3O95633 263 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 HPRT1P00492 218 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 UBE2MP61081 183 aaKnown RBP1.57□□□□□ -2.16
PTPN4-212ENST00000488896 BEX3Q00994 111 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 LRRC74AQ0VAA2 488 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 IDI1Q13907 227 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 ZNF141Q15928 474 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 CPTPQ5TA50 214 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 SPESP1Q6UW49 350 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 HORMAD1Q86X24 394 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 C19orf18Q8NEA5 215 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 SLC26A10Q8NG04 563 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 OR10W1Q8NGF6 305 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 MUC7Q8TAX7 377 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 RERGQ96A58 199 aaPredicted RBP1.57□□□□□ -2.16
PTPN4-212ENST00000488896 RPEQ96AT9 228 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 C8orf44Q96CB5 159 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 DYNLL2Q96FJ2 89 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 BTN2A3PQ96KV6 586 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 ZYG11BQ9C0D3 744 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 RRAGDQ9NQL2 400 aaPredicted RBP1.57□□□□□ -2.16
PTPN4-212ENST00000488896 RGS18Q9NS28 235 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 GCNT4Q9P109 453 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 RABL2BQ9UNT1 228 aa1.57□□□□□ -2.16
PTPN4-212ENST00000488896 RCL1Q9Y2P8 373 aaKnown RBP1.57□□□□□ -2.16
PTPN4-212ENST00000488896 KIAA1671Q9BY89 1806 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 CTAGE15A4D2H0 777 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 CCDC169A6NNP5 214 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 M0R3G1 203 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 AGTP01019 485 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 CLTAP09496 248 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 GABRG2P18507 467 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 PFN2P35080 140 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 NBL1P41271 181 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 SERPINB8P50452 374 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 FABP6P51161 128 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 MERTKQ12866 999 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 TRMT5Q32P41 509 aaKnown RBP1.56□□□□□ -2.16
PTPN4-212ENST00000488896 ZNF829Q3KNS6 432 aaPredicted RBP1.56□□□□□ -2.16
PTPN4-212ENST00000488896 SPANXN2Q5MJ10 180 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 ZNF660Q6AZW8 331 aaPredicted RBP1.56□□□□□ -2.16
PTPN4-212ENST00000488896 METAP1DQ6UB28 335 aaPredicted RBP1.56□□□□□ -2.16
PTPN4-212ENST00000488896 CD300LGQ6UXG3 332 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 CENPQQ7L2Z9 268 aaPredicted RBP1.56□□□□□ -2.16
PTPN4-212ENST00000488896 CTAGE6Q86UF2 777 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 GABRG1Q8N1C3 465 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 OR56A4Q8NGH8 313 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 OR5AR1Q8NGP9 310 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 OR52E5Q8NH55 327 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 MCUR1Q96AQ8 359 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 SGTBQ96EQ0 304 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 MRM3Q9HC36 420 aaKnown RBP1.56□□□□□ -2.16
PTPN4-212ENST00000488896 ZNF302Q9NR11 478 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 DCAF16Q9NXF7 216 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 HES2Q9Y543 173 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 INSRP06213 1382 aa1.56□□□□□ -2.16
PTPN4-212ENST00000488896 SORL1Q92673 2214 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 COL5A3P25940 1745 aaPredicted RBP1.55□□□□□ -2.16
PTPN4-212ENST00000488896 KBTBD11-OT1A0A1B0GTJ5 212 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 H7C0C1 242 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 ERCC1P07992 297 aaPredicted RBP1.55□□□□□ -2.16
PTPN4-212ENST00000488896 THRAP10827 490 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 NELFEP18615 380 aaKnown RBP1.55□□□□□ -2.16
PTPN4-212ENST00000488896 GGT2P36268 569 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 ATP5OP48047 213 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 RPS15AP62244 130 aaKnown RBP1.55□□□□□ -2.16
PTPN4-212ENST00000488896 ITIH4Q14624 930 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 RCN1Q15293 331 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 TWF2Q6IBS0 349 aaKnown RBP1.55□□□□□ -2.16
PTPN4-212ENST00000488896 Q6ZSR6 202 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 BBS5Q8N3I7 341 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 PQLC3Q8N755 202 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 ACTL9Q8TC94 416 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 CDS1Q92903 461 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 OTUB2Q96DC9 234 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 OR2V2Q96R30 315 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 CLN8Q9UBY8 286 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 HMGXB4Q9UGU5 601 aa1.55□□□□□ -2.16
PTPN4-212ENST00000488896 COL11A1P12107 1806 aaPredicted RBP1.54□□□□□ -2.16
PTPN4-212ENST00000488896 A0A075B6Q4 140 aa1.54□□□□□ -2.16
PTPN4-212ENST00000488896 TSPAN11A1L157 253 aa1.54□□□□□ -2.16
PTPN4-212ENST00000488896 A8MWL6 223 aa1.54□□□□□ -2.16
PTPN4-212ENST00000488896 CENPBD1B2RD01 187 aa1.54□□□□□ -2.16
PTPN4-212ENST00000488896 C15orf65H3BRN8 121 aa1.54□□□□□ -2.16
PTPN4-212ENST00000488896 M0R1X1 148 aa1.54□□□□□ -2.16
PTPN4-212ENST00000488896 SLC16A7O60669 478 aa1.54□□□□□ -2.16
PTPN4-212ENST00000488896 FGFR1OPO95684 399 aaKnown RBP1.54□□□□□ -2.16
PTPN4-212ENST00000488896 IGKV1-16P04430 117 aa1.54□□□□□ -2.16
PTPN4-212ENST00000488896 MMP7P09237 267 aaPredicted RBP1.54□□□□□ -2.16
PTPN4-212ENST00000488896 HTR1DP28221 377 aa1.54□□□□□ -2.16
PTPN4-212ENST00000488896 HMOX2P30519 316 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms