RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 IKZF2Q9UKS7 526 aa13.34□□□□□ -0.27
CTDSP1-209ENST00000488627 A0A0G2JMP0 313 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 A0A0X1KG70 313 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 A0A1W2PQL4 384 aaPredicted RBP13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 ZNF670-ZNF695F2Z2N8 137 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 J3QLI3 93 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 PHYHO14832 338 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 PHF1O43189 567 aaPredicted RBP13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 APOL3O95236 402 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 IRF2P14316 349 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 SNRPGP62308 76 aaKnown RBP13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 PAX2Q02962 417 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 MZT1Q08AG7 82 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 POU4F2Q12837 409 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 ZNF154Q13106 437 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 LYPD2Q6UXB3 125 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 GALNT4Q8N4A0 578 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 GCSAMQ8N6F7 178 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 C19orf18Q8NEA5 215 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 OR1M1Q8NGA1 313 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 OR4M2Q8NGB6 313 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 FAM81AQ8TBF8 368 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 C9orf16Q9BUW7 83 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 PAPOLGQ9BWT3 736 aaKnown RBP13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 C1orf123Q9NWV4 160 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 MIOXQ9UGB7 285 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 ORC6Q9Y5N6 252 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 MPC1Q9Y5U8 109 aa13.33□□□□□ -0.28
CTDSP1-209ENST00000488627 ZNF850A8MQ14 1090 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 ENTPD6O75354 484 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 TTRP02766 147 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 OR2T7P0C7T2 308 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 GABRB1P18505 474 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 GATA3P23771 443 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 CFHR2P36980 270 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 SRP14P37108 136 aaKnown RBP13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 PSMB10P40306 273 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 SNCBQ16143 134 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 OCLNQ16625 522 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 ZNF829Q3KNS6 432 aaPredicted RBP13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 FAM76BQ5HYJ3 339 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 DCAF12L2Q5VW00 463 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 ZNF841Q6ZN19 808 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 PLEKHG7Q6ZR37 379 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 ZBTB49Q6ZSB9 765 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 DEFB108BQ8NET1 73 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 OR2T27Q8NH04 317 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 OR8S1Q8NH09 359 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 OR51E1Q8TCB6 317 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 HPSE2Q8WWQ2 592 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 OR5P3Q8WZ94 311 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 ITFG2Q969R8 447 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 TBX5Q99593 518 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 TLNRD1Q9H1K6 362 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 METTL17Q9H7H0 456 aaPredicted RBP13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 GPR84Q9NQS5 396 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 LRCH1Q9Y2L9 728 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 R4GMQ9 66 aa13.32□□□□□ -0.28
CTDSP1-209ENST00000488627 MXRA5Q9NR99 2828 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 LOC105371242A0A075B767 164 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 A0A1B0GTI1 187 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 A6NLC8 198 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 J3QRE1 110 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 LGALS8O00214 317 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 RPS2P15880 293 aaKnown RBP13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 GNALP38405 381 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 CSNK2BP67870 215 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 IL5RAQ01344 420 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 PRDX4Q13162 271 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 ESCO2Q56NI9 601 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 SFRP4Q6FHJ7 346 aaPredicted RBP13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 DCDC5Q6ZRR9 648 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 Q6ZSR3 168 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 ELMOD2Q8IZ81 293 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 FTMTQ8N4E7 242 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 PIGCQ92535 297 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 RFKQ969G6 155 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 RNF166Q96A37 237 aaPredicted RBP13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 DACT3Q96B18 629 aaPredicted RBP13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 NEIL1Q96FI4 390 aaPredicted RBP13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 C7orf69Q9H7B7 122 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 RNPEPL1Q9HAU8 725 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 IMPAD1Q9NX62 359 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 AASSQ9UDR5 926 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 INSIG2Q9Y5U4 225 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 ARHGAP32A7KAX9 2087 aa13.31□□□□□ -0.28
CTDSP1-209ENST00000488627 ZNF816-ZNF321PA0A0X1KG74 233 aa13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 LOC110117498-PIK3R3F6TDL0 507 aa13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 DLGAP1O14490 977 aa13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 FSHBP01225 129 aa13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 ATP6V1B1P15313 513 aa13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 ZNF12P17014 697 aa13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 EGR1P18146 543 aa13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 CD80P33681 288 aa13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 MAP2K3P46734 347 aa13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 ZNF85Q03923 595 aa13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 LIPNQ5VXI9 398 aa13.3□□□□□ -0.28
CTDSP1-209ENST00000488627 WDR82Q6UXN9 313 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms