RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 C10orf105Q8TEF2 133 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 FAM168AQ92567 244 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 RDH5Q92781 318 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 MEGF10Q96KG7 1140 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 DIRC2Q96SL1 478 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 EGLN1Q9GZT9 426 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 Q9H521 79 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 SCN3BQ9NY72 215 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 FRRS1LQ9P0K9 344 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 ERVK-18Q9QC07 812 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 PIGLQ9Y2B2 252 aa9.36□□□□□ -0.91
UBE4B-210ENST00000488228 CAB39Q9Y376 341 aaPredicted RBP9.36□□□□□ -0.91
UBE4B-210ENST00000488228 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.36□□□□□ -0.912e-7■■□□□ 13.7
UBE4B-210ENST00000488228 ZNF816-ZNF321PA0A0X1KG74 233 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 A6NIN4 97 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 ZNF850A8MQ14 1090 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 H7C1Q1 480 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 SYT7O43581 403 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 MT-ND2P03891 347 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 CSF3P09919 207 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 CCDC159P0C7I6 412 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 COL8A2P25067 703 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 GNALP38405 381 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 DDOSTP39656 456 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 MAP2K3P46734 347 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 GBX2P52951 348 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-210ENST00000488228 PRDX4Q13162 271 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 MED21Q13503 144 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 ALKBH1Q13686 389 aaKnown RBP9.35□□□□□ -0.91
UBE4B-210ENST00000488228 SPNS3Q6ZMD2 512 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 TMPRSS11AQ6ZMR5 421 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 DOK3Q7L591 496 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 WDR86Q86TI4 376 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 MOGAT3Q86VF5 341 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 CIARTQ8N365 385 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-210ENST00000488228 PLPP7Q8NBV4 271 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 MAPK1IP1LQ8NDC0 245 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 SEMA6DQ8NFY4 1073 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 OR14K1Q8NGZ2 314 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 OR8S1Q8NH09 359 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 OR52N1Q8NH53 320 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 HPSE2Q8WWQ2 592 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 GATAD2BQ8WXI9 593 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 MYCBPQ99417 103 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-210ENST00000488228 PIMREGQ9BSJ6 248 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 BPESC1Q9GZL8 116 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 FGF23Q9GZV9 251 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-210ENST00000488228 PLEKHA1Q9HB21 404 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 MYOZ1Q9NP98 299 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-210ENST00000488228 ZNF275Q9NSD4 429 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-210ENST00000488228 CHCHD3Q9NX63 227 aaKnown RBP9.35□□□□□ -0.91
UBE4B-210ENST00000488228 TPRKBQ9Y3C4 175 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 SIRT4Q9Y6E7 314 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-210ENST00000488228 V9GYS6 101 aa9.35□□□□□ -0.91
UBE4B-210ENST00000488228 PNMA8CA0A1B0GUJ8 204 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 LOC390937A0A1W2PQ73 354 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 RNF223E7ERA6 249 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 DENRO43583 198 aaKnown RBP9.34□□□□□ -0.91
UBE4B-210ENST00000488228 RGS10O43665 173 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 ZFPL1O95159 310 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 ACHEP22303 614 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 CD200P41217 278 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 TGM4P49221 684 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 SRP9P49458 86 aaKnown RBP9.34□□□□□ -0.91
UBE4B-210ENST00000488228 CCR9P51686 369 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 CSNK2BP67870 215 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 HOXA4Q00056 320 aaPredicted RBP9.34□□□□□ -0.91
UBE4B-210ENST00000488228 RIPPLY1Q0D2K3 151 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 MAB21L1Q13394 359 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 CDK5R1Q15078 307 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 MPPED2Q15777 294 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 CEP78Q5JTW2 689 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 AVPI1Q5T686 147 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 PLCXD3Q63HM9 321 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 ZDHHC23Q8IYP9 409 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 FTMTQ8N4E7 242 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 ZNF676Q8N7Q3 588 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 ZNF485Q8NCK3 441 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 OR51A4Q8NGJ6 313 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 ZNF420Q8TAQ5 688 aaPredicted RBP9.34□□□□□ -0.91
UBE4B-210ENST00000488228 PIGCQ92535 297 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 RGP1Q92546 391 aaPredicted RBP9.34□□□□□ -0.91
UBE4B-210ENST00000488228 MYDGFQ969H8 173 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 ITPKCQ96DU7 683 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 PDCD1LG2Q9BQ51 273 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 SLC22A4Q9H015 551 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 DUSP21Q9H596 190 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 NARFLQ9H6Q4 476 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 CHODLQ9H9P2 273 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 TRIM36Q9NQ86 728 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 GPR173Q9NS66 373 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 UFSP2Q9NUQ7 469 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 IL19Q9UHD0 177 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 ENPP5Q9UJA9 477 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 NOP16Q9Y3C1 178 aaKnown RBP9.34□□□□□ -0.91
UBE4B-210ENST00000488228 MTORP42345 2549 aa9.34□□□□□ -0.91
UBE4B-210ENST00000488228 ABCA1O95477 2261 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 A0A096LNT2 108 aa9.33□□□□□ -0.92
UBE4B-210ENST00000488228 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-210ENST00000488228 TRBV2A0A0J9YWF9 115 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms