RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 MRPL2Q5T653 305 aaKnown RBP9.51□□□□□ -0.89
TRIM56-204ENST00000487252 TMEM236Q5W0B7 351 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 PTCHD4Q6ZW05 846 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 RFPL4BQ6ZWI9 263 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 ZNF367Q7RTV3 350 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 ZER1Q7Z7L7 766 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 VRK2Q86Y07 508 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 UEVLDQ8IX04 471 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 PDZD9Q8IXQ8 264 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 ZNF440Q8IYI8 595 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 PNLDC1Q8NA58 520 aaKnown RBP9.51□□□□□ -0.89
TRIM56-204ENST00000487252 OR2Z1Q8NG97 314 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 OR8J1Q8NGP2 316 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 OR6N1Q8NGY5 312 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 SLC41A3Q96GZ6 507 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 RCHY1Q96PM5 261 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 OR2V2Q96R30 315 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 ASCL2Q99929 193 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 POLR2J3Q9H1A7 115 aaKnown RBP9.51□□□□□ -0.89
TRIM56-204ENST00000487252 MTHFD2LQ9H903 347 aaPredicted RBP9.51□□□□□ -0.89
TRIM56-204ENST00000487252 IFT52Q9Y366 437 aa9.51□□□□□ -0.89
TRIM56-204ENST00000487252 LOC100509620A0A075B734 347 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 SURF4O15260 269 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 TPST2O60704 377 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 CYB5R3P00387 301 aaPredicted RBP9.5□□□□□ -0.89
TRIM56-204ENST00000487252 CD36P16671 472 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 STOMP27105 288 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 CHATP28329 748 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 GTF2E2P29084 291 aaKnown RBP9.5□□□□□ -0.89
TRIM56-204ENST00000487252 APLNRP35414 380 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 GSSP48637 474 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 PLP2Q04941 152 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 ST3GAL4Q11206 333 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 TRAM2Q15035 370 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 SLC36A2Q495M3 483 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 LRFN4Q6PJG9 635 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 UNQ6126/PRO20091Q6UXV3 157 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 Q6ZNX1 250 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 STX19Q8N4C7 294 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 SCAIQ8N9R8 606 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 FNDC8Q8TC99 324 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 GNPDA2Q8TDQ7 276 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 DPF1Q92782 380 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 TMEM54Q969K7 222 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 Q96MT0 163 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 CITED4Q96RK1 184 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 POLR2J2Q9GZM3 115 aaKnown RBP9.5□□□□□ -0.89
TRIM56-204ENST00000487252 ZNF702PQ9H963 129 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 SELENONQ9NZV5 590 aa9.5□□□□□ -0.89
TRIM56-204ENST00000487252 A0A087WUU8 490 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 CDHR4A6H8M9 788 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 M0R129 80 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 TIMM8AO60220 97 aaPredicted RBP9.49□□□□□ -0.89
TRIM56-204ENST00000487252 ENTPD6O75354 484 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 OR5F1O95221 314 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 FARS2O95363 451 aaKnown RBP9.49□□□□□ -0.89
TRIM56-204ENST00000487252 CHRM2P08172 466 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 GKN3PP0CG01 181 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 ADORA3P0DMS8 318 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 GRPRP30550 384 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 IFNGR2P38484 337 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 PPP1CBP62140 327 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 DGUOKQ16854 277 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 TIGD6Q17RP2 521 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 FAM69AQ5T7M9 428 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 RASSF6Q6ZTQ3 369 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 IGFN1Q86VF2 1251 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 OR6Q1Q8NGQ2 317 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 OR52P1PQ8NH57 321 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 NDNFQ8TB73 568 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 TAAR8Q969N4 342 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 EVA1AQ9H8M9 152 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 AMBNQ9NP70 447 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 AKIP1Q9NQ31 210 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 MRPS18AQ9NVS2 196 aaKnown RBP9.49□□□□□ -0.89
TRIM56-204ENST00000487252 EIF3KQ9UBQ5 218 aaKnown RBP9.49□□□□□ -0.89
TRIM56-204ENST00000487252 CTSZQ9UBR2 303 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 ZNF443Q9Y2A4 671 aaPredicted RBP9.49□□□□□ -0.89
TRIM56-204ENST00000487252 LSM2Q9Y333 95 aaKnown RBP9.49□□□□□ -0.89
TRIM56-204ENST00000487252 A3GALT2U3KPV4 340 aa9.49□□□□□ -0.89
TRIM56-204ENST00000487252 A0A1B0GVI7 797 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 H3BUX3 64 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 OR2T1O43869 369 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 CHST1O43916 411 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 PF4V1P10720 104 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 KITLGP21583 273 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 POU1F1P28069 291 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 OMPP47874 163 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 SERPINB10P48595 397 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 CSNK1A1P48729 337 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 ARF6P62330 175 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 ST3GAL3Q11203 375 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 TSPAN31Q12999 210 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 HABP2Q14520 560 aaPredicted RBP9.48□□□□□ -0.89
TRIM56-204ENST00000487252 GINS1Q14691 196 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 ZNF846Q147U1 533 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 FAM201AQ5SY85 155 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 ZNF836Q6ZNA1 936 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 SLC16A14Q7RTX9 510 aa9.48□□□□□ -0.89
TRIM56-204ENST00000487252 VMO1Q7Z5L0 202 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms