RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 F10P00742 488 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 CCL5P13501 91 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 EPHA1P21709 976 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 DUSP1P28562 367 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 PEBP1P30086 187 aaKnown RBP6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 NUBP1P53384 320 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 GABREP78334 506 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 MRPS34P82930 218 aaKnown RBP6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 TMPPEQ6ZT21 453 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 TMEM52Q8NDY8 209 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 TMEM104Q8NE00 496 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 HIST1H2BAQ96A08 127 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 ARHGAP5-AS1Q96IT6 56 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 GFI1Q99684 422 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 AICDAQ9GZX7 198 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 WDR13Q9H1Z4 485 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 GPR84Q9NQS5 396 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 MED29Q9NX70 200 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 OR5AC2Q9NZP5 309 aa6.86□□□□□ -1.31
COL6A4P1-202ENST00000487147 A0A1B0GTQ1 180 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 A0A1W2PPC1 479 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 FAM221BA6H8Z2 402 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 G3V3Q6 166 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 LINC01387J3KSC0 135 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 YIF1AO95070 293 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 HNF1AP20823 631 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 RPS4Y1P22090 263 aaKnown RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 GNG10P50151 68 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 MTCP1P56278 107 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 PNLIPRP3Q17RR3 467 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 PRTGQ2VWP7 1150 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 LHX8Q68G74 356 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 H1FNTQ75WM6 255 aaPredicted RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF383Q8NA42 475 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 SLC37A2Q8TED4 501 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 RSC1A1Q92681 617 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 PIGTQ969N2 578 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 CPNE4Q96A23 557 aaPredicted RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 HIST1H2AAQ96QV6 131 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 OR5B2Q96R09 309 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 AMELYQ99218 206 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 RBM24Q9BX46 236 aaKnown RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF286AQ9HBT8 521 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 PLEK2Q9NYT0 353 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 FNDC1Q4ZHG4 1894 aaPredicted RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZFP92A6NM28 416 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 MPZL1O95297 269 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 CD74P04233 296 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 DRD3P35462 400 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 LPAR6P43657 344 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 DHRS11Q6UWP2 260 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF813Q6ZN06 617 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 TIPARPQ7Z3E1 657 aaKnown RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZSCAN4Q8NAM6 433 aaPredicted RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 OR8U1Q8NH10 309 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 ROBO4Q8WZ75 1007 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 KLHL13Q9P2N7 655 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 GAB2Q9UQC2 676 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 WDR90Q96KV7 1748 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 SEC14L6B5MCN3 397 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 NPIPA2E9PIF3 369 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 NPIPA3F8WFD2 350 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 SCAF4O95104 1147 aaKnown RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 OR5H8P0DN80 308 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 PAX6P26367 422 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 RABIFP47224 123 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 SULT1A2P50226 295 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 ADPRHP54922 357 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 PIGPP57054 158 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 CEBPEQ15744 281 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 MICBQ29980 383 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 TCTN1Q2MV58 587 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 SP6Q3SY56 376 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 TMEM31Q5JXX7 168 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 PLXDC2Q6UX71 529 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 ATG4DQ86TL0 474 aaPredicted RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 CMTM1Q8IZ96 169 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 STT3BQ8TCJ2 826 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 RTN4IP1Q8WWV3 396 aaPredicted RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 MCHR2Q969V1 340 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 VSTM2LQ96N03 204 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 METTL9Q9H1A3 318 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 COA4Q9NYJ1 87 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 HPNP05981 417 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 OPRM1P35372 400 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 NKX2-1P43699 371 aaPredicted RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 RPS18P62269 152 aaKnown RBP6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 HSF1Q00613 529 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 FMODQ06828 376 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 CD226Q15762 336 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 BATFQ16520 125 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 TAF9Q16594 264 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 C1QL3Q5VWW1 255 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 SLC38A9Q8NBW4 561 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 FRZBQ92765 325 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 MALSU1Q96EH3 234 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 TVP23CQ96ET8 276 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 TIMP4Q99727 224 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 MAP3K3Q99759 626 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 NKX2-4Q9H2Z4 354 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms