RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 NKX6-1P78426 367 aaPredicted RBP9.44□□□□□ -0.9
CCDC171-208ENST00000486641 SP3Q02447 781 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 RELQ04864 619 aaPredicted RBP9.44□□□□□ -0.9
CCDC171-208ENST00000486641 USF2Q15853 346 aaPredicted RBP9.44□□□□□ -0.9
CCDC171-208ENST00000486641 CT45A2Q5DJT8 189 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 LHFPL1Q86WI0 220 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 TMEM156Q8N614 296 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 RAB39BQ96DA2 213 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 MVB12AQ96EY5 273 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 SCGB3A2Q96PL1 93 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 OR11A1Q9GZK7 315 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 NELFAQ9H3P2 528 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 PHPT1Q9NRX4 125 aaPredicted RBP9.44□□□□□ -0.9
CCDC171-208ENST00000486641 STARD5Q9NSY2 213 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 ANAPC10Q9UM13 185 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 IGLV1-36A0A0B4J1U3 117 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 PRSS37A4D1T9 235 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 FIGNL2A6NMB9 653 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 HEXBP07686 556 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 COX5BP10606 129 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 SFTPCP11686 197 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 HSD11B1P28845 292 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 IL2RGP31785 369 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 DRD3P35462 400 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 PPM1AP35813 382 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 OR8G1Q15617 311 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 ZNF385CQ66K41 422 aaPredicted RBP9.44□□□□□ -0.9
CCDC171-208ENST00000486641 OR2T2Q6IF00 324 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 FIGLAQ6QHK4 219 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 AVL9Q8NBF6 648 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 OR5H2Q8NGV7 314 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 OR52N5Q8NH56 324 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 ABHD5Q8WTS1 349 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 GINS3Q9BRX5 216 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 MRPL37Q9BZE1 423 aaKnown RBP9.44□□□□□ -0.9
CCDC171-208ENST00000486641 LPAR5Q9H1C0 372 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 Q9N2J8 555 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 OSGIN2Q9Y236 505 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 SLCO1B1Q9Y6L6 691 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 NOTCH4Q99466 2003 aa9.44□□□□□ -0.9
CCDC171-208ENST00000486641 TMEM269A0A1B0GVZ9 245 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 TMEM14DPA8MWL7 114 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 MKRN2OSH3BPM6 223 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 SYT7O43581 403 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 GMFGO60234 142 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 SCGB1D2O95969 90 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 IFI6P09912 130 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 TRGC1P0CF51 173 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 PTGER4P35408 488 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 APOBEC1P41238 236 aaKnown RBP9.43□□□□□ -0.9
CCDC171-208ENST00000486641 TMEM50BP56557 158 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 RAB4BP61018 213 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 CCL20P78556 96 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 PDGFRLQ15198 375 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 HIST2H3PS2Q5TEC6 136 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 LRRC18Q8N456 261 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 SLC22A24Q8N4F4 322 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 FAM160A2Q8N612 972 aaPredicted RBP9.43□□□□□ -0.9
CCDC171-208ENST00000486641 METTL21AQ8WXB1 218 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 ADAT3Q96EY9 351 aaPredicted RBP9.43□□□□□ -0.9
CCDC171-208ENST00000486641 POM121Q96HA1 1249 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 WDR92Q96MX6 357 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 CCNL2Q96S94 520 aaPredicted RBP9.43□□□□□ -0.9
CCDC171-208ENST00000486641 ST6GALNAC5Q9BVH7 336 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 TCEAL2Q9H3H9 227 aaPredicted RBP9.43□□□□□ -0.9
CCDC171-208ENST00000486641 PRODH2Q9UF12 536 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 TBC1D29Q9UFV1 150 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 TUBD1Q9UJT1 453 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 A8MWP6 167 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 TGFBR3LH3BV60 316 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 PHOX2AO14813 284 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 SCGNO76038 276 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 FREM3P0C091 2139 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 CEACAM6P40199 344 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 SUCLG1P53597 346 aaKnown RBP9.43□□□□□ -0.9
CCDC171-208ENST00000486641 UBE2KP61086 200 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 NUTF2P61970 127 aaKnown RBP9.43□□□□□ -0.9
CCDC171-208ENST00000486641 ACKR1Q16570 336 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 HAGHQ16775 308 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 POMZP3Q6PJE2 187 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 CHRDL2Q6WN34 429 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 GALNTL5Q7Z4T8 443 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 ZNF440Q8IYI8 595 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 FRZBQ92765 325 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 PACRGQ96M98 296 aaPredicted RBP9.43□□□□□ -0.9
CCDC171-208ENST00000486641 SPACA5Q96QH8 159 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 NUDT16L1Q9BRJ7 211 aaKnown RBP9.43□□□□□ -0.9
CCDC171-208ENST00000486641 S1PR5Q9H228 398 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 CRLF2Q9HC73 371 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 C1orf123Q9NWV4 160 aa9.43□□□□□ -0.9
CCDC171-208ENST00000486641 BORCS7-ASMTA0A0B4J1R7 106 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 A0A1B0GW64 132 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 METTL12A8MUP2 240 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 CLDN4O14493 209 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 HSD17B6O14756 317 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 TNFSF14O43557 240 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 CHRM2P08172 466 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 GSTP1P09211 210 aaKnown RBP9.42□□□□□ -0.9
CCDC171-208ENST00000486641 QDPRP09417 244 aa9.42□□□□□ -0.9
CCDC171-208ENST00000486641 PVRP15151 417 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms