RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 C12orf73Q69YU5 71 aa10.78□□□□□ -0.68
CHMP3-208ENST00000486404 C1orf229Q6ZS94 237 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-208ENST00000486404 KCTD8Q6ZWB6 473 aa10.78□□□□□ -0.68
CHMP3-208ENST00000486404 PRSS45Q7RTY3 260 aa10.78□□□□□ -0.68
CHMP3-208ENST00000486404 OR8B12Q8NGG6 310 aa10.78□□□□□ -0.68
CHMP3-208ENST00000486404 PYDC1Q8WXC3 89 aa10.78□□□□□ -0.68
CHMP3-208ENST00000486404 IL4I1Q96RQ9 567 aa10.78□□□□□ -0.68
CHMP3-208ENST00000486404 TEAD3Q99594 435 aa10.78□□□□□ -0.68
CHMP3-208ENST00000486404 SLC6A7Q99884 636 aa10.78□□□□□ -0.68
CHMP3-208ENST00000486404 OPN4Q9UHM6 478 aa10.78□□□□□ -0.68
CHMP3-208ENST00000486404 POLR3KQ9Y2Y1 108 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-208ENST00000486404 INSIG2Q9Y5U4 225 aa10.78□□□□□ -0.68
CHMP3-208ENST00000486404 TRAV38-1A0A0B4J264 116 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 IGHV2-70DA0A0C4DH43 119 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 TMEM269A0A1B0GVZ9 245 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 ZNF670-ZNF695F2Z2N8 137 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 TRAPPC2LH3BP13 241 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 FPR2P25090 351 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 HCCSP53701 268 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 PRDX4Q13162 271 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 SFRP4Q6FHJ7 346 aaPredicted RBP10.77□□□□□ -0.69
CHMP3-208ENST00000486404 RBMS3Q6XE24 437 aaKnown RBP10.77□□□□□ -0.69
CHMP3-208ENST00000486404 ZNF826PQ6ZT77 177 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 ASRGL1Q7L266 308 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 MEPCEQ7L2J0 689 aaKnown RBP10.77□□□□□ -0.69
CHMP3-208ENST00000486404 SLC35F2Q8IXU6 374 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 ZDHHC23Q8IYP9 409 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 LRRC29Q8WV35 223 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 OR8B4Q96RC9 309 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 MNTQ99583 582 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 RBM4BQ9BQ04 359 aaKnown RBP10.77□□□□□ -0.69
CHMP3-208ENST00000486404 ZNF319Q9P2F9 582 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 ERVK-18Q9QC07 812 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 RHBDD3Q9Y3P4 386 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 MPC1Q9Y5U8 109 aa10.77□□□□□ -0.69
CHMP3-208ENST00000486404 DNHD1Q96M86 4753 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 ACOD1A6NK06 481 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 ZNF850A8MQ14 1090 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 ADAM20O43506 726 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 ENSAO43768 121 aaKnown RBP10.76□□□□□ -0.69
CHMP3-208ENST00000486404 ZNF254O75437 659 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 EPHA2P29317 976 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 NPY4RP50391 375 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 CDC42P60953 191 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 CXCR4P61073 352 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 ACTR3P61158 418 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 ACTG1P63261 375 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 CSNK2BP67870 215 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 HOXA4Q00056 320 aaPredicted RBP10.76□□□□□ -0.69
CHMP3-208ENST00000486404 KPNB1Q14974 876 aaKnown RBP10.76□□□□□ -0.69
CHMP3-208ENST00000486404 BCL2L15Q5TBC7 163 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 ZFP1Q6P2D0 407 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 DEGS2Q6QHC5 323 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 ZNF322Q6U7Q0 402 aaPredicted RBP10.76□□□□□ -0.69
CHMP3-208ENST00000486404 LYPD2Q6UXB3 125 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 BCDIN3DQ7Z5W3 292 aaKnown RBP10.76□□□□□ -0.69
CHMP3-208ENST00000486404 THAP5Q7Z6K1 395 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 ZNF679Q8IYX0 411 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 SEMA6DQ8NFY4 1073 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 OR1M1Q8NGA1 313 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 OR51G2Q8NGK0 314 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 RAB40AQ8WXH6 277 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 C22orf15Q8WYQ4 148 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 PIGCQ92535 297 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 HIST1H2AAQ96QV6 131 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 OSBPL10Q9BXB5 764 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 GABARAPL3Q9BY60 117 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 PBOV1Q9GZY1 135 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 MOB1AQ9H8S9 216 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 ADGRL4Q9HBW9 690 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 FAM206AQ9NX38 181 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 IMPAD1Q9NX62 359 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 COPS3Q9UNS2 423 aa10.76□□□□□ -0.69
CHMP3-208ENST00000486404 IGHV3OR15-7A0A075B7D8 119 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 A0A0U1RQV5 110 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 ZNF816-ZNF321PA0A0X1KG74 233 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 TMEM210A6NLX4 147 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 LOC110117498-PIK3R3F6TDL0 507 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 TRIM77I1YAP6 450 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 NDUFA2O43678 99 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 VENTXO95231 258 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 FSHBP01225 129 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 GYPAP02724 150 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 EGR1P18146 543 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 ACKR3P25106 362 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 ATP6V1E1P36543 226 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 MAP2K3P46734 347 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 HILS1P60008 231 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 ROM1Q03395 351 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 POU4F2Q12837 409 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 MICBQ29980 383 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 AADACL4Q5VUY2 407 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 CD276Q5ZPR3 534 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 WDR25Q64LD2 544 aaPredicted RBP10.75□□□□□ -0.69
CHMP3-208ENST00000486404 USP43Q70EL4 1123 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 WDR86Q86TI4 376 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 C10orf67Q8IYJ2 551 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 GCSAMQ8N6F7 178 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 ZFAND2BQ8WV99 257 aa10.75□□□□□ -0.69
CHMP3-208ENST00000486404 ITPKCQ96DU7 683 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms