RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TMEM236Q5W0B7 351 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 C12orf73Q69YU5 71 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 Q6ZSR3 168 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 MEPCEQ7L2J0 689 aaKnown RBP5.85□□□□□ -1.47
VPS50-218ENST00000485994 MOGAT3Q86VF5 341 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 EGFL6Q8IUX8 553 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 ZNF679Q8IYX0 411 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 FTMTQ8N4E7 242 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 DEFB108BQ8NET1 73 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 SEMA6DQ8NFY4 1073 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 OR56B2PQ8NGI1 322 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 OR2AE1Q8NHA4 323 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 ZNF418Q8TF45 676 aaPredicted RBP5.85□□□□□ -1.47
VPS50-218ENST00000485994 TRUB1Q8WWH5 349 aaKnown RBP5.85□□□□□ -1.47
VPS50-218ENST00000485994 RAB40AQ8WXH6 277 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 CENPNQ96H22 339 aaPredicted RBP5.85□□□□□ -1.47
VPS50-218ENST00000485994 REEP6Q96HR9 211 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 JMJD8Q96S16 334 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 AMELYQ99218 206 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 SSBP3Q9BWW4 388 aaPredicted RBP5.85□□□□□ -1.47
VPS50-218ENST00000485994 MROQ9BYG7 248 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 TLNRD1Q9H1K6 362 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 METTL17Q9H7H0 456 aaPredicted RBP5.85□□□□□ -1.47
VPS50-218ENST00000485994 LPAR2Q9HBW0 351 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 MMP26Q9NRE1 261 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 TVP23BQ9NYZ1 205 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 UBAP1Q9NZ09 502 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 H2AFY2Q9P0M6 372 aaPredicted RBP5.85□□□□□ -1.47
VPS50-218ENST00000485994 ZNF319Q9P2F9 582 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 LAMP5Q9UJQ1 280 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 AUP1Q9Y679 476 aa5.85□□□□□ -1.47
VPS50-218ENST00000485994 LOC105371242A0A075B767 164 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 TRAV38-1A0A0B4J264 116 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 CCDC182A6NF36 153 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 SLC22A31A6NKX4 558 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 E9PQ18 207 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 PRKYO43930 277 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 SELENOFO60613 162 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 VENTXO95231 258 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 CYB5R3P00387 301 aaPredicted RBP5.84□□□□□ -1.47
VPS50-218ENST00000485994 ANXA2P07355 339 aaKnown RBP5.84□□□□□ -1.47
VPS50-218ENST00000485994 SLC2A1P11166 492 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 MUC1P15941 1255 aaPredicted RBP5.84□□□□□ -1.47
VPS50-218ENST00000485994 EPHA1P21709 976 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 CD80P33681 288 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 NAA10P41227 235 aaPredicted RBP5.84□□□□□ -1.47
VPS50-218ENST00000485994 COMPP49747 757 aaPredicted RBP5.84□□□□□ -1.47
VPS50-218ENST00000485994 GNB2P62879 340 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 IL5RAQ01344 420 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 APOFQ13790 326 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 TIGD6Q17RP2 521 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 SLC25A30Q5SVS4 291 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 ZBTB37Q5TC79 503 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 LCN1P1Q5VSP4 162 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 C1orf146Q5VVC0 180 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 CD276Q5ZPR3 534 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 WDR25Q64LD2 544 aaPredicted RBP5.84□□□□□ -1.47
VPS50-218ENST00000485994 C9orf139Q6ZV77 190 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 FAM57BQ71RH2 274 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 NLRC3Q7RTR2 1065 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 KRT77Q7Z794 578 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 GCSAMQ8N6F7 178 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 BBS1Q8NFJ9 593 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 OR1M1Q8NGA1 313 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 OR8B3Q8NGG8 313 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 OR8J1Q8NGP2 316 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 OR10Z1Q8NGY1 313 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 TMEM163Q8TC26 289 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 FAM216AQ8WUB2 273 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 LRTOMTQ8WZ04 291 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 OTULINQ96BN8 352 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 UPRTQ96BW1 309 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 C12orf43Q96C57 262 aaKnown RBP5.84□□□□□ -1.47
VPS50-218ENST00000485994 PGAM5Q96HS1 289 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 OR8B2Q96RD0 313 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 ADAT1Q9BUB4 502 aaKnown RBP5.84□□□□□ -1.47
VPS50-218ENST00000485994 C19orf24Q9BVV8 132 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 SUCNR1Q9BXA5 334 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 DNTTIP1Q9H147 329 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 PRDM13Q9H4Q3 707 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 KRT84Q9NSB2 600 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 KIF17Q9P2E2 1029 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 ERVK-18Q9QC07 812 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 OR5V1Q9UGF6 321 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 WARS2Q9UGM6 360 aaKnown RBP5.84□□□□□ -1.47
VPS50-218ENST00000485994 NUP50Q9UKX7 468 aa5.84□□□□□ -1.47
VPS50-218ENST00000485994 IGHV2-70DA0A0C4DH43 119 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 TMEM269A0A1B0GVZ9 245 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 OOEPA6NGQ2 149 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 TMEM210A6NLX4 147 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 DHRS7CA6NNS2 312 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 SRRM5B3KS81 715 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 TRIM77I1YAP6 450 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 EBAG9O00559 213 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 TBX1O43435 398 aa5.83□□□□□ -1.48
VPS50-218ENST00000485994 SRSF10O75494 262 aaKnown RBP5.83□□□□□ -1.48
VPS50-218ENST00000485994 ECDO95905 644 aaPredicted RBP5.83□□□□□ -1.48
VPS50-218ENST00000485994 ACAA1P09110 424 aaPredicted RBP5.83□□□□□ -1.48
VPS50-218ENST00000485994 RPS2P15880 293 aaKnown RBP5.83□□□□□ -1.48
VPS50-218ENST00000485994 EPHA2P29317 976 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms