RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 PIMREGQ9BSJ6 248 aa7.05□□□□□ -1.28
SF3A1-208ENST00000485618 RTL8AQ9BWD3 113 aa7.05□□□□□ -1.28
SF3A1-208ENST00000485618 PAPOLGQ9BWT3 736 aaKnown RBP7.05□□□□□ -1.28
SF3A1-208ENST00000485618 TTTY10Q9BZA0 68 aa7.05□□□□□ -1.28
SF3A1-208ENST00000485618 CCDC90BQ9GZT6 254 aa7.05□□□□□ -1.28
SF3A1-208ENST00000485618 TPK1Q9H3S4 243 aa7.05□□□□□ -1.28
SF3A1-208ENST00000485618 CHODLQ9H9P2 273 aa7.05□□□□□ -1.28
SF3A1-208ENST00000485618 MSL2Q9HCI7 577 aa7.05□□□□□ -1.28
SF3A1-208ENST00000485618 GPR84Q9NQS5 396 aa7.05□□□□□ -1.28
SF3A1-208ENST00000485618 ACOXLQ9NUZ1 547 aa7.05□□□□□ -1.28
SF3A1-208ENST00000485618 HHLA2Q9UM44 414 aa7.05□□□□□ -1.28
SF3A1-208ENST00000485618 MYRFQ9Y2G1 1151 aa7.05□□□□□ -1.28
SF3A1-208ENST00000485618 ZNF469Q96JG9 3925 aaPredicted RBP7.04□□□□□ -1.28
SF3A1-208ENST00000485618 ARFGEF3Q5TH69 2177 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 IGHV1-69-2A0A0G2JMI3 117 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 hCG_38984A0A1B0GV85 526 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 SLC1A7O00341 560 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 RGS10O43665 173 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 GATBO75879 557 aaKnown RBP7.04□□□□□ -1.28
SF3A1-208ENST00000485618 CDK1P06493 297 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 CD2P06729 351 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 ZNF20P17024 532 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 CA6P23280 308 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 CRYBB2P43320 205 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 ETV1P50549 477 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 CCL8P80075 99 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 ALKBH1Q13686 389 aaKnown RBP7.04□□□□□ -1.28
SF3A1-208ENST00000485618 OR8B8Q15620 311 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 KCNJ8Q15842 424 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 CLVS2Q5SYC1 327 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 SSX6Q7RTT6 188 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 OR56B2PQ8NGI1 322 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 PELI1Q96FA3 418 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 CPNE2Q96FN4 548 aaPredicted RBP7.04□□□□□ -1.28
SF3A1-208ENST00000485618 FAM71F1Q96KD3 344 aaPredicted RBP7.04□□□□□ -1.28
SF3A1-208ENST00000485618 SORCS2Q96PQ0 1159 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 ADAT1Q9BUB4 502 aaKnown RBP7.04□□□□□ -1.28
SF3A1-208ENST00000485618 CDCA4Q9BXL8 241 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 POFUT1Q9H488 388 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 FN3KRPQ9HA64 309 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 MYEF2Q9P2K5 600 aaKnown RBP7.04□□□□□ -1.28
SF3A1-208ENST00000485618 SLC7A11Q9UPY5 501 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 PPP1R3CQ9UQK1 317 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 SLC22A13Q9Y226 551 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 PIGLQ9Y2B2 252 aa7.04□□□□□ -1.28
SF3A1-208ENST00000485618 RAI1Q7Z5J4 1906 aaPredicted RBP7.03□□□□□ -1.28
SF3A1-208ENST00000485618 ZSCAN5BA6NJL1 495 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 TMEM210A6NLX4 147 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 CLDN25C9JDP6 229 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 P2RY10O00398 339 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 MAGEB3O15480 346 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 MAGEB4O15481 346 aaPredicted RBP7.03□□□□□ -1.28
SF3A1-208ENST00000485618 XPNPEP2O43895 674 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 PNPP00491 289 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 NRASP01111 189 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 TTRP02766 147 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 LIMS3P0CW19 117 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 LIMS4P0CW20 117 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 CPT2P23786 658 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 WNT4P56705 351 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 GABARAPL2P60520 117 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 BDH1Q02338 343 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 MSMPQ1L6U9 139 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 KCTD8Q6ZWB6 473 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 ZDHHC23Q8IYP9 409 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 ZCCHC24Q8N2G6 241 aaKnown RBP7.03□□□□□ -1.28
SF3A1-208ENST00000485618 SVOPQ8N4V2 548 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 RFLNBQ8N5W9 214 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 OR5A2Q8NGI9 324 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 OR5D14Q8NGL3 314 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 GPR148Q8TDV2 347 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 GATAD2BQ8WXI9 593 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 PP6455Q8WZ26 134 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 PIGCQ92535 297 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 CCL17Q92583 94 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 OR2V2Q96R30 315 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 DUSP21Q9H596 190 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 VCX3AQ9NNX9 186 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 G6PC2Q9NQR9 355 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 CKLFQ9UBR5 152 aa7.03□□□□□ -1.28
SF3A1-208ENST00000485618 A0A1B0GWJ7 208 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 OR5B21A6NL26 309 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 A6NLC8 198 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 PRR32B1ATL7 298 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 PPIHO43447 177 aaKnown RBP7.02□□□□□ -1.29
SF3A1-208ENST00000485618 SRSF10O75494 262 aaKnown RBP7.02□□□□□ -1.29
SF3A1-208ENST00000485618 CYB5AP00167 134 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 CD1AP06126 327 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 CCL1P22362 96 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 PRKACBP22694 351 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 CRHBPP24387 322 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 GIFP27352 417 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 MAPK3P27361 379 aaPredicted RBP7.02□□□□□ -1.29
SF3A1-208ENST00000485618 PSMB10P40306 273 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 CD200P41217 278 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 MAGEB1P43366 347 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 RANBP1P43487 201 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 GPR6P46095 362 aaPredicted RBP7.02□□□□□ -1.29
SF3A1-208ENST00000485618 CHN2P52757 468 aa7.02□□□□□ -1.29
SF3A1-208ENST00000485618 GNG3P63215 75 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms