RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 OPN4Q9UHM6 478 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 OAZ3Q9UMX2 235 aa11.62□□□□□ -0.55
VARS-225ENST00000482996 TRAV38-1A0A0B4J264 116 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 SAC3D1A6NKF1 404 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 ANXA2P2A6NMY6 339 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 TRAPPC2LH3BP13 241 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 M0R129 80 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 ZNF12P17014 697 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 RIDAP52758 137 aaKnown RBP11.61□□□□□ -0.55
VARS-225ENST00000482996 SRSF2Q01130 221 aaKnown RBP11.61□□□□□ -0.55
VARS-225ENST00000482996 IL5RAQ01344 420 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 ROM1Q03395 351 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 SLC34A1Q06495 639 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 ZNF154Q13106 437 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 OR8B8Q15620 311 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 ZNF829Q3KNS6 432 aaPredicted RBP11.61□□□□□ -0.55
VARS-225ENST00000482996 AADACL4Q5VUY2 407 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 BTNL3Q6UXE8 466 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 ZNF679Q8IYX0 411 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 PQLC1Q8N2U9 271 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 OR8B12Q8NGG6 310 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 FAM81AQ8TBF8 368 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 OR8B4Q96RC9 309 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 IL4I1Q96RQ9 567 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 MNTQ99583 582 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 RBM4BQ9BQ04 359 aaKnown RBP11.61□□□□□ -0.55
VARS-225ENST00000482996 C19orf24Q9BVV8 132 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 VCXQ9H320 206 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 RIBC2Q9H4K1 309 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 CLN8Q9UBY8 286 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 IKZF2Q9UKS7 526 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 RHBDD3Q9Y3P4 386 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 INSIG2Q9Y5U4 225 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 MPC1Q9Y5U8 109 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 AUP1Q9Y679 476 aa11.61□□□□□ -0.55
VARS-225ENST00000482996 TMEM269A0A1B0GVZ9 245 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 OOEPA6NGQ2 149 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 C3orf80F5H4A9 247 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 PSMD9O00233 223 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 PHYHO14832 338 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 NDUFA2O43678 99 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 FPR2P25090 351 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 DCTDP32321 178 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 CD80P33681 288 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 EFNB1P98172 346 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 ARMCX4Q5H9R4 360 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 ZNF826PQ6ZT77 177 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 BCDIN3DQ7Z5W3 292 aaKnown RBP11.6□□□□□ -0.55
VARS-225ENST00000482996 SLC35F2Q8IXU6 374 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 BPIFB2Q8N4F0 458 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 C19orf18Q8NEA5 215 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 ITFG2Q969R8 447 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 JMJD8Q96S16 334 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 RTL8AQ9BWD3 113 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 SUCNR1Q9BXA5 334 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 GABARAPL3Q9BY60 117 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 ORC6Q9Y5N6 252 aa11.6□□□□□ -0.55
VARS-225ENST00000482996 DOCK11Q5JSL3 2073 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 A0A0U1RQV5 110 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 ZNF670-ZNF695F2Z2N8 137 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 CST4P01036 141 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 ATP6V1B1P15313 513 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 ACKR3P25106 362 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 MAP2K3P46734 347 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 NPY4RP50391 375 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 PRDX4Q13162 271 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 WDR25Q64LD2 544 aaPredicted RBP11.59□□□□□ -0.55
VARS-225ENST00000482996 SFRP4Q6FHJ7 346 aaPredicted RBP11.59□□□□□ -0.55
VARS-225ENST00000482996 ZNF322Q6U7Q0 402 aaPredicted RBP11.59□□□□□ -0.55
VARS-225ENST00000482996 LYPD2Q6UXB3 125 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 USP43Q70EL4 1123 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 COMMD2Q86X83 199 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 GALNT4Q8N4A0 578 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 OR1M1Q8NGA1 313 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 RAB40AQ8WXH6 277 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 PIGCQ92535 297 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 HIST1H2AAQ96QV6 131 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 TTTY10Q9BZA0 68 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 ADGRL4Q9HBW9 690 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 CLN6Q9NWW5 311 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 FAM206AQ9NX38 181 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 HAO2Q9NYQ3 351 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 ERVK-18Q9QC07 812 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 WARS2Q9UGM6 360 aaKnown RBP11.59□□□□□ -0.55
VARS-225ENST00000482996 COPS3Q9UNS2 423 aa11.59□□□□□ -0.55
VARS-225ENST00000482996 IGHV2-70DA0A0C4DH43 119 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 TMEM210A6NLX4 147 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 ZNF850A8MQ14 1090 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 H3BNX3 289 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 ADAM20O43506 726 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 FSHBP01225 129 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 POLR2IP36954 125 aaKnown RBP11.58□□□□□ -0.56
VARS-225ENST00000482996 PSMB10P40306 273 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 CDC42P60953 191 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 CXCR4P61073 352 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 PAX8Q06710 450 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 POU4F2Q12837 409 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 CD276Q5ZPR3 534 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 THAP5Q7Z6K1 395 aa11.58□□□□□ -0.56
VARS-225ENST00000482996 ZDHHC23Q8IYP9 409 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms