RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 MS4A10Q96PG2 267 aa5.54□□□□□ -1.52
PRPF4B-205ENST00000480058 PLA2G12AQ9BZM1 189 aa5.54□□□□□ -1.52
PRPF4B-205ENST00000480058 TMEM30AQ9NV96 361 aa5.54□□□□□ -1.52
PRPF4B-205ENST00000480058 BET1LQ9NYM9 111 aa5.54□□□□□ -1.52
PRPF4B-205ENST00000480058 CTSFQ9UBX1 484 aa5.54□□□□□ -1.52
PRPF4B-205ENST00000480058 PISDQ9UG56 409 aa5.54□□□□□ -1.52
PRPF4B-205ENST00000480058 A0A1B0GTL3 188 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 C7orf77A4D0Y5 90 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 A6NL46 340 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 BCAT2O15382 392 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 TOX3O15405 576 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 NME2P1O60361 137 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 HRASP01112 189 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 ARSAP15289 507 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 NME1P15531 152 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 NQO2P16083 231 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 AKR1C3P42330 323 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 FABP6P51161 128 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 FOXO1Q12778 655 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 NR0B2Q15466 257 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 BTLAQ7Z6A9 289 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 RPS4Y2Q8TD47 263 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 SARAFQ96BY9 339 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 NOL4LQ96MY1 436 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 NAA60Q9H7X0 242 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 CD207Q9UJ71 328 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 KLF13Q9Y2Y9 288 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 URGCP-MRPS24S4R325 110 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 CLEC18AA5D8T8 446 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 MAP1LC3B2A6NCE7 125 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 OTOL1A6NHN0 477 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 WISP3O95389 354 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 EPPINO95925 133 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 WNT1P04628 370 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 NPBWR1P48145 328 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 SNRPEP62304 92 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 DLK1P80370 383 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 FAM78AQ5JUQ0 283 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 LYSMD4Q5XG99 296 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 LRRTM1Q86UE6 522 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 CLEC18CQ8NCF0 446 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 OR4F5Q8NH21 305 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 OR4F4Q96R69 305 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 MACROD1Q9BQ69 325 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 RHNO1Q9BSD3 238 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 TMEM204Q9BSN7 226 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 ANGPTL4Q9BY76 406 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 MAP1LC3BQ9GZQ8 125 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 TMEM191AQ9H0A3 160 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 ANKUB1A6NFN9 424 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 MPTX1A8MV57 137 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 LEUTXA8MZ59 168 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 CTSVO60911 334 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 PTBP3O95758 552 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 PNPP00491 289 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 QDPRP09417 244 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 ERVS71-1P61550 626 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 GNG3P63215 75 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 HTRA3P83110 453 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 TBC1D28Q2M2D7 210 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 VAX1Q5SQQ9 334 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 ANKRD34AQ69YU3 496 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 SSX8Q7RTT4 187 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 ANKRD33Q7Z3H0 272 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 DOK4Q8TEW6 326 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 NAT8Q9UHE5 227 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 ST3GAL6Q9Y274 331 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 MPC1Q9Y5U8 109 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 CHEK1O14757 476 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 HLA-GP17693 338 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 AVPR2P30518 371 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 MAT1AQ00266 395 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 PPP1R1AQ13522 171 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 OR10D4PQ8NGN7 298 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 UCK1Q9HA47 277 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 MANBALQ9NQG1 85 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 TMEM167BQ9NRX6 74 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 CXXC1Q9P0U4 656 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 SLC22A13Q9Y226 551 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 ZNF320A2RRD8 509 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 C9orf170A2RU37 121 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 PLRG1O43660 514 aaKnown RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 DHRS3O75911 302 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 PGA4P0DJD7 388 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 PGA5P0DJD9 388 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 OTX2P32243 289 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 GPR3P46089 330 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 ATP5IP56385 69 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 KLF9Q13886 244 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 SLC10A1Q14973 349 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 SMIM21Q3B7S5 101 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 TMEM88Q6PEY1 159 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 TMEM123Q8N131 208 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 LILRA3Q8N6C8 439 aaPredicted RBP5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 FAM181AQ8N9Y4 354 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 OR10A7Q8NGE5 316 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 OR51H1Q8NH63 302 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 PFN4Q8NHR9 129 aa5.53□□□□□ -1.52
PRPF4B-205ENST00000480058 SPPL3Q8TCT6 385 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms