RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 WDR86Q86TI4 376 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 ZBTB46Q86UZ6 589 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 CYP4Z1Q86W10 505 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 OR5D13Q8NGL4 314 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 DUS3LQ96G46 650 aaKnown RBP13.95□□□□□ -0.18
VIM-204ENST00000478746 MED30Q96HR3 178 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 AJUBAQ96IF1 538 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 OPA3Q9H6K4 179 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 MRGBPQ9NV56 204 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 GID8Q9NWU2 228 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 HAO2Q9NYQ3 351 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 SLC25A10Q9UBX3 287 aaPredicted RBP13.95□□□□□ -0.18
VIM-204ENST00000478746 ZNF391Q9UJN7 358 aa13.95□□□□□ -0.18
VIM-204ENST00000478746 H0YAE9 185 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 ANGPTL7O43827 346 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 CHST1O43916 411 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 TIPRLO75663 272 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 ZNF823P16415 610 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 FAHP16930 419 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 NDUFB7P17568 137 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 GMFBP60983 142 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 HABP2Q14520 560 aaPredicted RBP13.94□□□□□ -0.18
VIM-204ENST00000478746 MAPRE2Q15555 327 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 STUMQ69YW2 141 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 HCP5Q6MZN7 132 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 OR4K13Q8NH42 304 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 DNTTIP1Q9H147 329 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 ZNF702PQ9H963 129 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 SNTG1Q9NSN8 517 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 MRPL22Q9NWU5 206 aaKnown RBP13.94□□□□□ -0.18
VIM-204ENST00000478746 KCNG2Q9UJ96 466 aa13.94□□□□□ -0.18
VIM-204ENST00000478746 LOC100653049A0A140TA62 436 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 MEGF11A6BM72 1044 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 NKX6-3A6NJ46 265 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 CDIPTO14735 213 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 PEX14O75381 377 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 KRT34O76011 436 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 H1F0P07305 194 aaKnown RBP13.93□□□□□ -0.18
VIM-204ENST00000478746 HIST1H1CP16403 213 aaKnown RBP13.93□□□□□ -0.18
VIM-204ENST00000478746 OTX1P32242 354 aaPredicted RBP13.93□□□□□ -0.18
VIM-204ENST00000478746 BMXP51813 675 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 PRKXP51817 358 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 GNGT1P63211 74 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 KLF10Q13118 480 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 FGD3Q5JSP0 725 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 ZNF788Q6ZQV5 615 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 PIFOQ8TCI5 191 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 OCSTAMPQ9BR26 566 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 FGFR1OP2Q9NVK5 253 aa13.93□□□□□ -0.18
VIM-204ENST00000478746 A0A1W2PRQ8 180 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 OR6C68A6NDL8 312 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 ARPC3O15145 178 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 XRCC2O43543 280 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 SLC2A1P11166 492 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 MSX2P35548 267 aaPredicted RBP13.92□□□□□ -0.18
VIM-204ENST00000478746 RPS27P42677 84 aaKnown RBP13.92□□□□□ -0.18
VIM-204ENST00000478746 SLC7A2P52569 658 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 CAV3P56539 151 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 CD69Q07108 199 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 DGCR6Q14129 220 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 TAF13Q15543 124 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 DGUOKQ16854 277 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 CBLL1Q75N03 491 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 Q8N2B8 174 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 PAPD5Q8NDF8 572 aaKnown RBP13.92□□□□□ -0.18
VIM-204ENST00000478746 GAFA1Q96PS6 74 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 RAB3IPQ96QF0 476 aaPredicted RBP13.92□□□□□ -0.18
VIM-204ENST00000478746 COPS4Q9BT78 406 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 FN3KQ9H479 309 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 KRCC1Q9NPI7 259 aaPredicted RBP13.92□□□□□ -0.18
VIM-204ENST00000478746 ENPP4Q9Y6X5 453 aa13.92□□□□□ -0.18
VIM-204ENST00000478746 WI2-2373I1.2A0A1W2PRP0 233 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 TFF1P04155 84 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 NOS3P29474 1203 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 SLC6A6P31641 620 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 CYB561A3Q8NBI2 242 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 OR4C15Q8NGM1 316 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 WIPF2Q8TF74 440 aaPredicted RBP13.91□□□□□ -0.18
VIM-204ENST00000478746 SPSB4Q96A44 273 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 HSH2DQ96JZ2 352 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 DDOQ99489 341 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 TLNRD1Q9H1K6 362 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 WDR13Q9H1Z4 485 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 CENPMQ9NSP4 180 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 AP3M1Q9Y2T2 418 aa13.91□□□□□ -0.18
VIM-204ENST00000478746 FAM32AQ9Y421 112 aaKnown RBP13.91□□□□□ -0.18
VIM-204ENST00000478746 A0A1W2PRX2 142 aa13.9□□□□□ -0.18
VIM-204ENST00000478746 CXCR6O00574 342 aa13.9□□□□□ -0.18
VIM-204ENST00000478746 GSTA4O15217 222 aa13.9□□□□□ -0.18
VIM-204ENST00000478746 SIGLEC5O15389 551 aa13.9□□□□□ -0.18
VIM-204ENST00000478746 TBX1O43435 398 aa13.9□□□□□ -0.18
VIM-204ENST00000478746 ACAA1P09110 424 aaPredicted RBP13.9□□□□□ -0.18
VIM-204ENST00000478746 PAICSP22234 425 aaKnown RBP13.9□□□□□ -0.18
VIM-204ENST00000478746 LGALS4P56470 323 aa13.9□□□□□ -0.18
VIM-204ENST00000478746 FAM3AP98173 230 aa13.9□□□□□ -0.18
VIM-204ENST00000478746 SEC23BQ15437 767 aa13.9□□□□□ -0.18
VIM-204ENST00000478746 SLC16A9Q7RTY1 509 aa13.9□□□□□ -0.18
VIM-204ENST00000478746 DCXRQ7Z4W1 244 aa13.9□□□□□ -0.18
VIM-204ENST00000478746 CPLX4Q7Z7G2 160 aa13.9□□□□□ -0.18
VIM-204ENST00000478746 SDR9C7Q8NEX9 313 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms