RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 AGTP01019 485 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 RPN2P04844 631 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 CRYGBP07316 175 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR56A5P0C7T3 313 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SFTPCP11686 197 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 MLNP12872 115 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 NELFEP18615 380 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 OGNP20774 298 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 ATP6V1B2P21281 511 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 RPS3P23396 243 aaKnown RBP eCLIP2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 GLP1RP43220 463 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 TTPAP49638 278 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 GPM6AP51674 278 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 GTF2A1P52655 376 aaPredicted RBP2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 APOC4P55056 127 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 GFERP55789 205 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SARNPP82979 210 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 NDPQ00604 133 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 CDC20Q12834 499 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 TMED2Q15363 201 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 IL34Q6ZMJ4 242 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC25A48Q6ZT89 311 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC26A11Q86WA9 606 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 PAQR7Q86WK9 346 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 LRRC6Q86X45 466 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 TGIF2LYQ8IUE0 185 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 PRR22Q8IZ63 422 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 TPRX1Q8N7U7 411 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR2L5Q8NG80 312 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR2L3Q8NG85 312 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 MARC2Q969Z3 335 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 KIAA1143Q96AT1 154 aaPredicted RBP2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 RASD2Q96D21 266 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 CMTM7Q96FZ5 175 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 ITCHQ96J02 903 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 IMMP1LQ96LU5 166 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 FMO2Q99518 471 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 CCDC77Q9BR77 488 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 POLR2J2Q9GZM3 115 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 IL22Q9GZX6 179 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 POLR2J3Q9H1A7 115 aaKnown RBP2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR52A5Q9H2C5 316 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 RANBP3Q9H6Z4 567 aaPredicted RBP2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC25A22Q9H936 323 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 FANCEQ9HB96 536 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 RDH14Q9HBH5 336 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC40A1Q9NP59 571 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 BATF3Q9NR55 127 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 GIN1Q9NXP7 522 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC39A1Q9NY26 324 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SPATA7Q9P0W8 599 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC23A2Q9UGH3 650 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 GNPTGQ9UJJ9 305 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 IKZF2Q9UKS7 526 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 GUCA1BQ9UMX6 200 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SAR1BQ9Y6B6 198 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 FREM3P0C091 2139 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 SPTA1P02549 2419 aa2.77□□□□□ -1.97
CDC42BPA-212ENST00000478573 DOPEY2Q9Y3R5 2298 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 MYO18BQ8IUG5 2567 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 FASNP49327 2511 aaKnown RBP2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 SVILO95425 2214 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 LAMA5O15230 3695 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 A0A0J9YY10 115 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR2AG2A6NM03 316 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 C2orf74A8MZ97 194 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 C21orf140B9A014 251 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 KRTAP4-16G5E9R7 235 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 H3BQF6 201 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 PRMT5O14744 637 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 AGPAT2O15120 278 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 POLR1CO15160 346 aaPredicted RBP2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 PFDN6O15212 129 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 CASC3O15234 703 aaKnown RBP2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 POP7O75817 140 aaKnown RBP2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR7A10O76100 309 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 TMEM50AO95807 157 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 FGGP02679 453 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 ERGP11308 486 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 CCL4P13236 92 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 COX7A1P24310 79 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 CA5AP35218 305 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 RPL22P35268 128 aaKnown RBP2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 MAGEA3P43357 314 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 PLP1P60201 277 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 BASP1P80723 227 aaKnown RBP2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 ARFRP1Q13795 201 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 POU6F1Q14863 301 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 ATP6AP1Q15904 470 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 ZNF79Q15937 498 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 TMIGD1Q6UXZ0 262 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 ERI1Q8IV48 349 aaKnown RBP2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 PIANPQ8IYJ0 282 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC35F6Q8N357 371 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 DNAAF3Q8N9W5 541 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR52K1Q8NGK4 314 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR1L6Q8NGR2 347 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR5K2Q8NHB8 316 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms