RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 DYRK2Q92630 601 aa11.98□□□□□ -0.49
SMARCE1-209ENST00000478349 ITFG2Q969R8 447 aa11.98□□□□□ -0.49
SMARCE1-209ENST00000478349 ASB9Q96DX5 294 aa11.98□□□□□ -0.49
SMARCE1-209ENST00000478349 PGAM5Q96HS1 289 aa11.98□□□□□ -0.49
SMARCE1-209ENST00000478349 DPAGT1Q9H3H5 408 aa11.98□□□□□ -0.49
SMARCE1-209ENST00000478349 NIPAL2Q9H841 368 aa11.98□□□□□ -0.49
SMARCE1-209ENST00000478349 FAM96BQ9Y3D0 163 aa11.98□□□□□ -0.49
SMARCE1-209ENST00000478349 MPC1Q9Y5U8 109 aa11.98□□□□□ -0.49
SMARCE1-209ENST00000478349 hCG_38984A0A1B0GV85 526 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 MDFIC2A0A1B0GVS7 189 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 TCRBV5S2A0A599 114 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 TMEM210A6NLX4 147 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 PRR23D1E9PI22 279 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 NDUFB3O43676 98 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 NDUFA7O95182 113 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 LHBP01229 141 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 LYNP07948 512 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 SFTPBP07988 381 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 PRR23D2P0DMB1 279 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 MMP9P14780 707 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 MDKP21741 143 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 GSK3AP49840 483 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 FAM3AP98173 230 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 GUCA2AQ02747 115 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 CDONQ4KMG0 1287 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 LRRC10Q5BKY1 277 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 FIP1L1Q6UN15 594 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 GALNT4Q8N4A0 578 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 KIR3DL3Q8N743 410 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 OR1M1Q8NGA1 313 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 NPRL2Q8WTW4 380 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 NSL1Q96IY1 281 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 HIST1H2AAQ96QV6 131 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 TBX15Q96SF7 602 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 ABHD6Q9BV23 337 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 DNTTIP1Q9H147 329 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 CNTD2Q9H8S5 307 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 DNAJC27Q9NZQ0 273 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 DNAJB11Q9UBS4 358 aa11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 RPUSD1Q9UJJ7 312 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-209ENST00000478349 CENPVL3A0A0U1RRI6 287 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 PRODHO43272 600 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 CST1P01037 141 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 HMGN1P05114 100 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 MELTFP08582 738 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 CLUP10909 449 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 EEF1B2P24534 225 aaKnown RBP11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 OPRL1P41146 370 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 ZNF121P58317 390 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 LINC01590Q5TEZ4 76 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 RUSC1-AS1Q66K80 236 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 ZNF826PQ6ZT77 177 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 ZNRF4Q8WWF5 429 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 LHX4Q969G2 390 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 SIRPDQ9H106 197 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 YY1AP1Q9H869 796 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 SMURF1Q9HCE7 757 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 TNFRSF19Q9NS68 423 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 ONECUT1Q9UBC0 465 aa11.96□□□□□ -0.49
SMARCE1-209ENST00000478349 CLPSL1A2RUU4 121 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 M0QZ24 198 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 TIMM23O14925 209 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 E2F6O75461 281 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 FBP1P09467 338 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 PSKH1P11801 424 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 OMGP23515 440 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 ARF6P62330 175 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 PPP1R8Q12972 351 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 WDR38Q5JTN6 314 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 SLC35D3Q5M8T2 416 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 OLFML2AQ68BL7 652 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 BRICD5Q6PL45 260 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 WDR82Q6UXN9 313 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 GDPGP1Q6ZNW5 385 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 LDLRAD3Q86YD5 345 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 TIGD4Q8IY51 512 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 OR10Z1Q8NGY1 313 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 OTOSQ8NHW6 89 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 FAM81AQ8TBF8 368 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 WFDC12Q8WWY7 111 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 SGK3Q96BR1 496 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 CCDC124Q96CT7 223 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 MED30Q96HR3 178 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 FEVQ99581 238 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 CHIAQ9BZP6 476 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 TLNRD1Q9H1K6 362 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 OR51V1Q9H2C8 321 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 BRD7Q9NPI1 651 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 ARHGAP32A7KAX9 2087 aa11.95□□□□□ -0.5
SMARCE1-209ENST00000478349 IGHV3OR15-7A0A075B7D8 119 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 FAM183AA6NL82 134 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 CDIPTO14735 213 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 WIPF1O43516 503 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 POU1F1P28069 291 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 PSMA6P60900 246 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 RPS7P62081 194 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 BLMHQ13867 455 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 METAP1DQ6UB28 335 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 KCTD8Q6ZWB6 473 aa11.94□□□□□ -0.5
SMARCE1-209ENST00000478349 CCDC197Q8NCU1 140 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms