RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 HOXA4Q00056 320 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-222ENST00000478095 KRTAP1-1Q07627 177 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 RAB40BQ12829 278 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 IL18R1Q13478 541 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 TMEM249Q2WGJ8 235 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 CDONQ4KMG0 1287 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 WDR38Q5JTN6 314 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 IZUMO2Q6UXV1 221 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 CATSPERDQ86XM0 798 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 ELMOD2Q8IZ81 293 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 PLPP7Q8NBV4 271 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 OR8S1Q8NH09 359 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 CLDND2Q8NHS1 167 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 ALG8Q9BVK2 526 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 SLC22A4Q9H015 551 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 GCM1Q9NP62 436 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 UFSP2Q9NUQ7 469 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 PCDHGB1Q9Y5G3 927 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 SNX5Q9Y5X3 404 aa8.67□□□□□ -1.02
HDAC6-222ENST00000478095 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-222ENST00000478095 LOC100289279A0A1B0GTE1 492 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF850A8MQ14 1090 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 XPNPEP2O43895 674 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 GMDSO60547 372 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF205O95201 554 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 CYB5R3P00387 301 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-222ENST00000478095 IGLV3-1P01715 115 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 GRPP07492 148 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 TACSTD2P09758 323 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 IGHV4-31P0DP07 118 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 FAHP16930 419 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF16P17020 682 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-222ENST00000478095 PMELP40967 661 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 CD200P41217 278 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 KIR3DL2P43630 455 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 CHN2P52757 468 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 ACTA2P62736 377 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 ACTG2P63267 376 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 PRDX4Q13162 271 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 GALEQ14376 348 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 MPPED2Q15777 294 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 DMRTC1Q5HYR2 192 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 LAIR2Q6ISS4 152 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 PRSS35Q8N3Z0 413 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 FTMTQ8N4E7 242 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 CSNK2A3Q8NEV1 391 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 SEMA6DQ8NFY4 1073 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 PIGCQ92535 297 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 RAB1CQ92928 201 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 PELI1Q96FA3 418 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 TIMD4Q96H15 378 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 VCX3BQ9H321 246 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 ISG20L2Q9H9L3 353 aaKnown RBP8.66□□□□□ -1.02
HDAC6-222ENST00000478095 MRPS18AQ9NVS2 196 aaKnown RBP8.66□□□□□ -1.02
HDAC6-222ENST00000478095 ERVK13-1Q9NX77 482 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF391Q9UJN7 358 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 RRP15Q9Y3B9 282 aaKnown RBP8.66□□□□□ -1.02
HDAC6-222ENST00000478095 NOP16Q9Y3C1 178 aaKnown RBP8.66□□□□□ -1.02
HDAC6-222ENST00000478095 HSPE1-MOB4S4R3N1 261 aa8.66□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF816-ZNF321PA0A0X1KG74 233 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 A0A1B0GTI1 187 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 A6NIN4 97 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 A6NLC8 198 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 DHRS3O75911 302 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 HEXAP06865 529 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 MAP2K3P46734 347 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 NANOS3P60323 173 aaKnown RBP8.65□□□□□ -1.02
HDAC6-222ENST00000478095 CSNK2BP67870 215 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 SLC3A1Q07837 685 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 RIPK1Q13546 671 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 KLHL22Q53GT1 634 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 CEP78Q5JTW2 689 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 FAM201AQ5SY85 155 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF826PQ6ZT77 177 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 THAP5Q7Z6K1 395 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 PEG10Q86TG7 708 aaKnown RBP8.65□□□□□ -1.02
HDAC6-222ENST00000478095 WDR86Q86TI4 376 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 RDH10Q8IZV5 341 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 BOLLQ8N9W6 283 aaKnown RBP8.65□□□□□ -1.02
HDAC6-222ENST00000478095 C19orf18Q8NEA5 215 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 BPIFB6Q8NFQ5 453 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 OR2G2Q8NGZ5 317 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 MRPL48Q96GC5 212 aaKnown RBP8.65□□□□□ -1.02
HDAC6-222ENST00000478095 GAL3ST1Q99999 423 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 ZNF649Q9BS31 505 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 FGF23Q9GZV9 251 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-222ENST00000478095 INPP5EQ9NRR6 644 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 C14orf119Q9NWQ9 140 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 C1orf123Q9NWV4 160 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 UBAP1Q9NZ09 502 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 PIGLQ9Y2B2 252 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 NPTNQ9Y639 398 aa8.65□□□□□ -1.02
HDAC6-222ENST00000478095 TEP1Q99973 2627 aaKnown RBP8.64□□□□□ -1.03
HDAC6-222ENST00000478095 A0A1B0GVI7 797 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 LOC107986453A0A1B0GWG9 222 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 hCG_1807616A0A1W2PRN6 198 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 LRRC30A6NM36 301 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 ANXA2P2A6NMY6 339 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 E9PI62 339 aa8.64□□□□□ -1.03
HDAC6-222ENST00000478095 H0YJX3 145 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms