RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 TIMD4Q96H15 378 aa11.13□□□□□ -0.63
TOP3A-205ENST00000477508 MEGF10Q96KG7 1140 aa11.13□□□□□ -0.63
TOP3A-205ENST00000477508 LYZL4Q96KX0 146 aa11.13□□□□□ -0.63
TOP3A-205ENST00000477508 ZNF649Q9BS31 505 aa11.13□□□□□ -0.63
TOP3A-205ENST00000477508 ADAT1Q9BUB4 502 aaKnown RBP11.13□□□□□ -0.63
TOP3A-205ENST00000477508 REG4Q9BYZ8 158 aa11.13□□□□□ -0.63
TOP3A-205ENST00000477508 C14orf119Q9NWQ9 140 aa11.13□□□□□ -0.63
TOP3A-205ENST00000477508 PPP1R3CQ9UQK1 317 aa11.13□□□□□ -0.63
TOP3A-205ENST00000477508 SLC22A13Q9Y226 551 aa11.13□□□□□ -0.63
TOP3A-205ENST00000477508 TPRKBQ9Y3C4 175 aa11.13□□□□□ -0.63
TOP3A-205ENST00000477508 FLNAP21333 2647 aaKnown RBP11.13□□□□□ -0.63
TOP3A-205ENST00000477508 TEP1Q99973 2627 aaKnown RBP11.12□□□□□ -0.63
TOP3A-205ENST00000477508 ZNF816-ZNF321PA0A0X1KG74 233 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 A0A1B0GVI7 797 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 TRIM64A6NGJ6 449 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 TRIM64BA6NI03 449 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 VWC2LB2RUY7 222 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 CLDN25C9JDP6 229 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 CDC14BO60729 498 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 RP2O75695 350 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 ISG15P05161 165 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 CCL1P22362 96 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 COL8A2P25067 703 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 GATA4P43694 442 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 TGM4P49221 684 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 CCDC58Q4VC31 144 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 WDR38Q5JTN6 314 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 LAIR2Q6ISS4 152 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 KLHL36Q8N4N3 616 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 OR8S1Q8NH09 359 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 OR52N1Q8NH53 320 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 ITLN1Q8WWA0 313 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 CCL17Q92583 94 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 HPS1Q92902 700 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 RAB1CQ92928 201 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 MYDGFQ969H8 173 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 YIPF5Q969M3 257 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 C10orf35Q96D05 121 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 FAM71F1Q96KD3 344 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-205ENST00000477508 C18orf12Q96KH6 178 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 HIST1H2AAQ96QV6 131 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 MICU1Q9BPX6 476 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 PAPOLGQ9BWT3 736 aaKnown RBP11.12□□□□□ -0.63
TOP3A-205ENST00000477508 ENPP5Q9UJA9 477 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 HIVEP1P15822 2718 aa11.12□□□□□ -0.63
TOP3A-205ENST00000477508 F8P00451 2351 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 A0A1B0GTI1 187 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 LRRC30A6NM36 301 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 F5H5P2 479 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 LYNX1G3V0Z9 82 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 H0YL77 283 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 H7C1Q1 480 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 SLC1A7O00341 560 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 P2RY10O00398 339 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 PPIHO43447 177 aaKnown RBP11.11□□□□□ -0.63
TOP3A-205ENST00000477508 SYT7O43581 403 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 XPNPEP2O43895 674 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 PTBP3O95758 552 aaKnown RBP11.11□□□□□ -0.63
TOP3A-205ENST00000477508 HLA-DPB1P04440 258 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 LYNX1P0DP58 116 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 USF1P22415 310 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-205ENST00000477508 ACKR3P25106 362 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 PSMB10P40306 273 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 GPR6P46095 362 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-205ENST00000477508 ETV1P50549 477 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 CDH15P55291 814 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 LOXL1Q08397 574 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-205ENST00000477508 ALKBH1Q13686 389 aaKnown RBP11.11□□□□□ -0.63
TOP3A-205ENST00000477508 ZNF181Q2M3W8 571 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 RNLSQ5VYX0 342 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 AHSA2Q719I0 299 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 PRSS35Q8N3Z0 413 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 PPP1R14AQ96A00 147 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 COX4I2Q96KJ9 171 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 BPESC1Q9GZL8 116 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 ISG20L2Q9H9L3 353 aaKnown RBP11.11□□□□□ -0.63
TOP3A-205ENST00000477508 FN3KRPQ9HA64 309 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 GCM1Q9NP62 436 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 ZNF275Q9NSD4 429 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-205ENST00000477508 FKBP14Q9NWM8 211 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 FRRS1LQ9P0K9 344 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 BLOC1S6Q9UL45 172 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 RHBDD3Q9Y3P4 386 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 V9GYS6 101 aa11.11□□□□□ -0.63
TOP3A-205ENST00000477508 TMEM210A6NLX4 147 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 TMEM212A6NML5 194 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 RNF223E7ERA6 249 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 CDK1P06493 297 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 IRF2P14316 349 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 PRDX4Q13162 271 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 MAB21L1Q13394 359 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 RBM48Q5RL73 367 aaKnown RBP11.1□□□□□ -0.63
TOP3A-205ENST00000477508 RPL22L1Q6P5R6 122 aaKnown RBP11.1□□□□□ -0.63
TOP3A-205ENST00000477508 ZDHHC23Q8IYP9 409 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 C1orf87Q8N0U7 546 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 ZNF676Q8N7Q3 588 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 OR11L1Q8NGX0 322 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 OR14K1Q8NGZ2 314 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 PIGCQ92535 297 aa11.1□□□□□ -0.63
TOP3A-205ENST00000477508 RNF166Q96A37 237 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms