RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 Q6ZR03 302 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 THAP5Q7Z6K1 395 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 TCEANCQ8N8B7 351 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 NPEPL1Q8NDH3 523 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 RHOXF1Q8NHV9 184 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 C4orf45Q96LM5 186 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 NMNAT3Q96T66 252 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 DDOQ99489 341 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 TMEM246Q9BRR3 403 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 PCGF1Q9BSM1 259 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 RERGLQ9H628 205 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 FBLN5Q9UBX5 448 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 LRRC42Q9Y546 428 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 TIMM10BQ9Y5J6 103 aa11.55□□□□□ -0.56
FAM3A-218ENST00000475657 IGHV1-69DA0A0B4J2H0 117 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 ZNF879B4DU55 563 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 PRR23D1E9PI22 279 aaPredicted RBP11.54□□□□□ -0.56
FAM3A-218ENST00000475657 IGHV1-69P01742 117 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 CST2P09228 141 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 PRR23D2P0DMB1 279 aaPredicted RBP11.54□□□□□ -0.56
FAM3A-218ENST00000475657 MMP9P14780 707 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 GABRB1P18505 474 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 KITLGP21583 273 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 TGFBR2P37173 567 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 CDKN2AP42771 156 aaKnown RBP11.54□□□□□ -0.56
FAM3A-218ENST00000475657 GUCA1AP43080 201 aaPredicted RBP11.54□□□□□ -0.56
FAM3A-218ENST00000475657 SLC25A1P53007 311 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 ZNF181Q2M3W8 571 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 ZNF404Q494X3 552 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 MEDAGQ5VYS4 303 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 WDR25Q64LD2 544 aaPredicted RBP11.54□□□□□ -0.56
FAM3A-218ENST00000475657 C11orf88Q6PI97 169 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 DNM1P34Q6PK57 102 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 ARL9Q6T311 187 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 GID4Q8IVV7 300 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 ALDH16A1Q8IZ83 802 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 FBLIM1Q8WUP2 373 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 CFHR4Q92496 578 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 SLC7A6Q92536 515 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 Q96MT0 163 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 OR2V2Q96R30 315 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 IL4I1Q96RQ9 567 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 TBX15Q96SF7 602 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 CDADC1Q9BWV3 514 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 NMNAT2Q9BZQ4 307 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 SYT4Q9H2B2 425 aa11.54□□□□□ -0.56
FAM3A-218ENST00000475657 OR6C68A6NDL8 312 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 C22orf46C9J442 243 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 PRODHO43272 600 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 TOX4O94842 621 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 SFTPBP07988 381 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 CRABP1P29762 137 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 DBPQ10586 325 aaPredicted RBP11.53□□□□□ -0.56
FAM3A-218ENST00000475657 MED21Q13503 144 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 AADACL4Q5VUY2 407 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 NXNL2Q5VZ03 156 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 PLBD1Q6P4A8 553 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 ZNF841Q6ZN19 808 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 VASH1Q7L8A9 365 aaPredicted RBP11.53□□□□□ -0.56
FAM3A-218ENST00000475657 CYB561A3Q8NBI2 242 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 OR2T4Q8NH00 348 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 CNBD2Q96M20 576 aa11.53□□□□□ -0.56
FAM3A-218ENST00000475657 EPPK1P58107 5090 aaKnown RBP11.52□□□□□ -0.57
FAM3A-218ENST00000475657 FAM183AA6NL82 134 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 SNTNA6NMZ2 147 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 C12orf71A8MTZ7 269 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 ABHD16AO95870 558 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 SPI1P17947 270 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 MSR1P21757 451 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 CENPAP49450 140 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 NPY4RP50391 375 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 PCBD1P61457 104 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 SLC35D3Q5M8T2 416 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 CD276Q5ZPR3 534 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 DCDC5Q6ZRR9 648 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.52□□□□□ -0.57
FAM3A-218ENST00000475657 ZBTB46Q86UZ6 589 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 CPOQ8IVL8 374 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 APH1BQ8WW43 257 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 RFKQ969G6 155 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 CMBLQ96DG6 245 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 WDFY2Q96P53 400 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 RPRD1BQ9NQG5 326 aaKnown RBP11.52□□□□□ -0.57
FAM3A-218ENST00000475657 POLE4Q9NR33 117 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 TBCCD1Q9NVR7 557 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 CLN6Q9NWW5 311 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 VPREB3Q9UKI3 123 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 STARD10Q9Y365 291 aa11.52□□□□□ -0.57
FAM3A-218ENST00000475657 IGLV1-36A0A0B4J1U3 117 aa11.51□□□□□ -0.57
FAM3A-218ENST00000475657 IGHV3-64DA0A0J9YX35 117 aa11.51□□□□□ -0.57
FAM3A-218ENST00000475657 A0A0U1RQK1 487 aa11.51□□□□□ -0.57
FAM3A-218ENST00000475657 LRRC30A6NM36 301 aa11.51□□□□□ -0.57
FAM3A-218ENST00000475657 RNASEK-C17orf49H0YIS7 233 aa11.51□□□□□ -0.57
FAM3A-218ENST00000475657 DOK2O60496 412 aa11.51□□□□□ -0.57
FAM3A-218ENST00000475657 WBP4O75554 376 aaKnown RBP11.51□□□□□ -0.57
FAM3A-218ENST00000475657 ZNF205O95201 554 aa11.51□□□□□ -0.57
FAM3A-218ENST00000475657 CTLA4P16410 223 aa11.51□□□□□ -0.57
FAM3A-218ENST00000475657 PSMB10P40306 273 aa11.51□□□□□ -0.57
FAM3A-218ENST00000475657 HTR5AP47898 357 aa11.51□□□□□ -0.57
FAM3A-218ENST00000475657 BLVRAP53004 296 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms