RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 IFT27Q9BW83 186 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 OR52D1Q9H346 318 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 SP140LQ9H930 580 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 DUX4Q9UBX2 424 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 SLC25A10Q9UBX3 287 aaPredicted RBP10.28□□□□□ -0.76
SKA3-206ENST00000475251 CAPN7Q9Y6W3 813 aa10.28□□□□□ -0.76
SKA3-206ENST00000475251 LOC100653049A0A140TA62 436 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 KRT34O76011 436 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 FAHP16930 419 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 CFL1P23528 166 aaKnown RBP10.27□□□□□ -0.77
SKA3-206ENST00000475251 GNALP38405 381 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 PRB3Q04118 309 aaPredicted RBP10.27□□□□□ -0.77
SKA3-206ENST00000475251 LIPEQ05469 1076 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 STUMQ69YW2 141 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 ZDHHC21Q8IVQ6 265 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 C11orf53Q8IXP5 236 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 PNKDQ8N490 385 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 SDR9C7Q8NEX9 313 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 PROKR2Q8NFJ6 384 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 OR10Z1Q8NGY1 313 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 FAM162AQ96A26 154 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 KCNJ15Q99712 375 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 MEGF9Q9H1U4 602 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 MRPL22Q9NWU5 206 aaKnown RBP10.27□□□□□ -0.77
SKA3-206ENST00000475251 HAO2Q9NYQ3 351 aa10.27□□□□□ -0.77
SKA3-206ENST00000475251 OR6C68A6NDL8 312 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 ANXA2P2A6NMY6 339 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 H0YAE9 185 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.26□□□□□ -0.77
SKA3-206ENST00000475251 NDUFAB1O14561 156 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 CDIPTO14735 213 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 PEX14O75381 377 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 APOC1P02654 83 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 POU1F1P28069 291 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 IFNGR2P38484 337 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 SLC15A1P46059 708 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 CAV3P56539 151 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 SMIM11AP58511 58 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 IL5RAQ01344 420 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 TIGD6Q17RP2 521 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 SLC16A9Q7RTY1 509 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 DCXRQ7Z4W1 244 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 WDR86Q86TI4 376 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 CSNK2A3Q8NEV1 391 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 OR2T4Q8NH00 348 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 MICU1Q9BPX6 476 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 TLNRD1Q9H1K6 362 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 MMP28Q9H239 520 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 ABCB9Q9NP78 766 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 CMTM6Q9NX76 183 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 ZNF391Q9UJN7 358 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 N6AMT1Q9Y5N5 214 aa10.26□□□□□ -0.77
SKA3-206ENST00000475251 KMT2CQ8NEZ4 4911 aaKnown RBP10.26□□□□□ -0.77
SKA3-206ENST00000475251 NBEAL2Q6ZNJ1 2754 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 TRBV23-1A0A0A0MS06 115 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 TRBV4-1A0A0J9YWV2 114 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 A0A1W2PPH5 198 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 TMEM210A6NLX4 147 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 ZNF878C9JN71 531 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 TBX1O43435 398 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 ANGPTL7O43827 346 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 GLCEO94923 617 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 MPIG6BO95866 241 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 NDUFB7P17568 137 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 CD33P20138 364 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 PRKXP51817 358 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 DLX1P56177 255 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 GRB2P62993 217 aaKnown RBP10.25□□□□□ -0.77
SKA3-206ENST00000475251 CSNK2BP67870 215 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 ELF3P78545 371 aaPredicted RBP10.25□□□□□ -0.77
SKA3-206ENST00000475251 FAM3AP98173 230 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 SEC23BQ15437 767 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 FOXB2Q5VYV0 432 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 CRIP3Q6Q6R5 217 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 ZNF788Q6ZQV5 615 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 SLC15A3Q8IY34 581 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 PAPD5Q8NDF8 572 aaKnown RBP10.25□□□□□ -0.77
SKA3-206ENST00000475251 SLAMF6Q96DU3 332 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 ITPKCQ96DU7 683 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 DUS3LQ96G46 650 aaKnown RBP10.25□□□□□ -0.77
SKA3-206ENST00000475251 RAB3IPQ96QF0 476 aaPredicted RBP10.25□□□□□ -0.77
SKA3-206ENST00000475251 RTL8AQ9BWD3 113 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 PAPOLGQ9BWT3 736 aaKnown RBP10.25□□□□□ -0.77
SKA3-206ENST00000475251 CDCA4Q9BXL8 241 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 FN3KQ9H479 309 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 SAR1AQ9NR31 198 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 CENPMQ9NSP4 180 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 ADA2Q9NZK5 511 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 NDUFAF4Q9P032 175 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 CD300AQ9UGN4 299 aa10.25□□□□□ -0.77
SKA3-206ENST00000475251 hCG_1809904A0A1W2PP81 198 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 A0A1W2PPE2 198 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 A0A1W2PR64 198 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 A0A1W2PRV1 198 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 HMGB1P1B2RPK0 211 aaPredicted RBP10.24□□□□□ -0.77
SKA3-206ENST00000475251 SLC22A2O15244 555 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 SIGLEC5O15389 551 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 ANXA2P07355 339 aaKnown RBP10.24□□□□□ -0.77
SKA3-206ENST00000475251 SPARCP09486 303 aa10.24□□□□□ -0.77
SKA3-206ENST00000475251 SLC2A1P11166 492 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms