RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 PLGLB1Q02325 96 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 POM121L1PQ3SYA9 428 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM201Q5SNT2 666 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FCRL6Q6DN72 434 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 TRNP1Q6NT89 227 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 STEAP1BQ6NZ63 245 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 PRSS55Q6UWB4 352 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 UNQ6126/PRO20091Q6UXV3 157 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SLC7A13Q8TCU3 470 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 CLDN23Q96B33 292 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 VSTM2LQ96N03 204 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 RASL10BQ96S79 203 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SIGMAR1Q99720 223 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ULBP2Q9BZM5 246 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 DUSP21Q9H596 190 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 INPP5EQ9NRR6 644 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 STEAP1Q9UHE8 339 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 HDGFL3Q9Y3E1 203 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 DOCK3Q8IZD9 2030 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 COL4A4P53420 1690 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 GJE1A6NN92 205 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF205O95201 554 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SCG5P05408 212 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 GADD45AP24522 165 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 LMO2P25791 158 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 RPL22P35268 128 aaKnown RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 PIGAP37287 484 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 PRLHRP49683 370 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF133P52736 654 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SNU13P55769 128 aaKnown RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 OR4D2P58180 307 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 PRR31Q5SQ13 230 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 COL5A1-AS1Q5SY13 56 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 C1QL3Q5VWW1 255 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 MRPL14Q6P1L8 145 aaKnown RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 DND1Q8IYX4 353 aaKnown RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 NECAP1Q8NC96 275 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 OR2A12Q8NGT7 310 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 COQ8AQ8NI60 647 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF563Q8TA94 476 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 NAT6Q93015 286 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 HIST1H2AAQ96QV6 131 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF703Q9H7S9 590 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 RBFOX1Q9NWB1 397 aaKnown RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 WIPI2Q9Y4P8 454 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 MYO9BQ13459 2157 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 HTTP42858 3142 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 BRCA2P51587 3418 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 A0A096LPK6 155 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 A0A0U1RRA0 63 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 MEIS3P2A8K0S8 358 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 CASKO14936 926 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF682O95780 498 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 IL7RP16871 459 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FCGR2BP31994 310 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SNAI3Q3KNW1 292 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FRRS1Q6ZNA5 592 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 CBR4Q8N4T8 237 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SDR9C7Q8NEX9 313 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 OR5AP2Q8NGF4 316 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 OR4L1Q8NH43 312 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 MAFAQ8NHW3 353 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ISOC2Q96AB3 205 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 RHNO1Q9BSD3 238 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SLC25A51Q9H1U9 297 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 WDR13Q9H1Z4 485 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ALKBH4Q9NXW9 302 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 B4GALT7Q9UBV7 327 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 MYLKQ15746 1914 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 MYO18AQ92614 2054 aaKnown RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 TRIP12Q14669 1992 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 UBE2QL1A1L167 161 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A18PA6NE21 464 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A16PA6NEW6 464 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 C2CD4BA6NLJ0 364 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A9PA6NNJ1 464 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A5PA8MXJ8 464 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 H7BYZ3 331 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SYNGR3O43761 229 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ENSAO43768 121 aaKnown RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 THY1P04216 161 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A15PP0C7V4 464 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A14PP0C7W9 464 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 PET100P0DJ07 73 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SLC2A2P11168 524 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 PRTN3P24158 256 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 WNT3AP56704 352 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 SLC35A2P78381 396 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 IL13RA1P78552 427 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 IL10RBQ08334 325 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 KIAA0141Q14154 515 aaPredicted RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ALG10BQ5I7T1 473 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM268Q5VZI3 342 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 H3F3CQ6NXT2 135 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ADAMTSL4Q6UY14 1074 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 RPTNQ6XPR3 784 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 DEF8Q6ZN54 512 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms