RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 FAM76BQ5HYJ3 339 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 WDR38Q5JTN6 314 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 FAM220AQ7Z4H9 259 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 FTMTQ8N4E7 242 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 OR10AD1Q8NGE0 317 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 ITLN1Q8WWA0 313 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 C1orf159Q96HA4 380 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 C4orf36Q96KX1 117 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 BPESC1Q9GZL8 116 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 ABCB9Q9NP78 766 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 FRRS1LQ9P0K9 344 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 GNG8Q9UK08 70 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 SLC22A13Q9Y226 551 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 CAB39Q9Y376 341 aaPredicted RBP14.31□□□□□ -0.12
SCAF11-206ENST00000474828 RHBDD3Q9Y3P4 386 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 CACNG2Q9Y698 323 aa14.31□□□□□ -0.12
SCAF11-206ENST00000474828 LOC100289279A0A1B0GTE1 492 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 ANKRD30BLA7E2S9 258 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 RNF223E7ERA6 249 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 F5H5P2 479 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 HLA-DPB1P04440 258 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 ETV1P50549 477 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 KRTAP1-1Q07627 177 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 OR14K1Q8NGZ2 314 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 ITPKCQ96DU7 683 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 TMEM80Q96HE8 168 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 ADAT1Q9BUB4 502 aaKnown RBP14.3□□□□□ -0.12
SCAF11-206ENST00000474828 TLNRD1Q9H1K6 362 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 RASSF4Q9H2L5 321 aa14.3□□□□□ -0.12
SCAF11-206ENST00000474828 ISG20L2Q9H9L3 353 aaKnown RBP14.3□□□□□ -0.12
SCAF11-206ENST00000474828 EXOSC1Q9Y3B2 195 aaKnown RBP14.3□□□□□ -0.12
SCAF11-206ENST00000474828 SETD2Q9BYW2 2564 aaPredicted RBP14.29□□□□□ -0.12
SCAF11-206ENST00000474828 ZNF816-ZNF321PA0A0X1KG74 233 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 OR4C45A6NMZ5 311 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 XPNPEP2O43895 674 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 MTRF1O75570 445 aaKnown RBP14.29□□□□□ -0.12
SCAF11-206ENST00000474828 RPP14O95059 124 aaKnown RBP14.29□□□□□ -0.12
SCAF11-206ENST00000474828 INHBBP09529 407 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 CCDC159P0C7I6 412 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 UBCP0CG48 685 aaKnown RBP14.29□□□□□ -0.12
SCAF11-206ENST00000474828 USF1P22415 310 aaPredicted RBP14.29□□□□□ -0.12
SCAF11-206ENST00000474828 PMELP40967 661 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 MVKQ03426 396 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 SLC3A1Q07837 685 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 ST3GAL4Q11206 333 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 OR8G1Q15617 311 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 HFEQ30201 348 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 CCDC58Q4VC31 144 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 DOK3Q7L591 496 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 SEMA6DQ8NFY4 1073 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 OR52N1Q8NH53 320 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 C10orf35Q96D05 121 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 DUSP21Q9H596 190 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 TMEM106BQ9NUM4 274 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 PPP1R3CQ9UQK1 317 aa14.29□□□□□ -0.12
SCAF11-206ENST00000474828 IGHV4-61A0A0C4DH41 118 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 J3QLW9 94 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 CDC14BO60729 498 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 RPSAP08865 295 aaKnown RBP14.28□□□□□ -0.12
SCAF11-206ENST00000474828 ZNF19P17023 458 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 CFHR2P36980 270 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 SLC35A2P78381 396 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 MZT1Q08AG7 82 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 RIPPLY1Q0D2K3 151 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 GFOD2Q3B7J2 385 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 TMEM244Q5VVB8 128 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 WDR86Q86TI4 376 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 BIVMQ86UB2 503 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 OR5P3Q8WZ94 311 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 HPS1Q92902 700 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 ZNF184Q99676 751 aaPredicted RBP14.28□□□□□ -0.12
SCAF11-206ENST00000474828 FGF23Q9GZV9 251 aaPredicted RBP14.28□□□□□ -0.12
SCAF11-206ENST00000474828 PPP1R3EQ9H7J1 279 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 MTORP42345 2549 aa14.28□□□□□ -0.12
SCAF11-206ENST00000474828 CR1P17927 2039 aa14.27□□□□□ -0.12
SCAF11-206ENST00000474828 CLDN25C9JDP6 229 aa14.27□□□□□ -0.13
SCAF11-206ENST00000474828 E9PI62 339 aa14.27□□□□□ -0.13
SCAF11-206ENST00000474828 TMEM178BH3BS89 294 aa14.27□□□□□ -0.13
SCAF11-206ENST00000474828 SLC1A7O00341 560 aa14.27□□□□□ -0.13
SCAF11-206ENST00000474828 P2RY10O00398 339 aa14.27□□□□□ -0.13
SCAF11-206ENST00000474828 DENRO43583 198 aaKnown RBP14.27□□□□□ -0.13
SCAF11-206ENST00000474828 PSMB10P40306 273 aa14.27□□□□□ -0.13
SCAF11-206ENST00000474828 GPR6P46095 362 aaPredicted RBP14.27□□□□□ -0.13
SCAF11-206ENST00000474828 ALKBH1Q13686 389 aaKnown RBP14.27□□□□□ -0.13
SCAF11-206ENST00000474828 C11orf53Q8IXP5 236 aa14.27□□□□□ -0.13
SCAF11-206ENST00000474828 HPSE2Q8WWQ2 592 aa14.27□□□□□ -0.13
SCAF11-206ENST00000474828 FAM71F1Q96KD3 344 aaPredicted RBP14.27□□□□□ -0.13
SCAF11-206ENST00000474828 CDCA4Q9BXL8 241 aa14.27□□□□□ -0.13
SCAF11-206ENST00000474828 C14orf119Q9NWQ9 140 aa14.27□□□□□ -0.13
SCAF11-206ENST00000474828 CLEC2DQ9UHP7 191 aa14.27□□□□□ -0.13
SCAF11-206ENST00000474828 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.26□□□□□ -0.13
SCAF11-206ENST00000474828 OGG1O15527 345 aa14.26□□□□□ -0.13
SCAF11-206ENST00000474828 TPD52L2O43399 206 aaKnown RBP14.26□□□□□ -0.13
SCAF11-206ENST00000474828 LHBP01229 141 aa14.26□□□□□ -0.13
SCAF11-206ENST00000474828 IGHV2-70P01814 119 aa14.26□□□□□ -0.13
SCAF11-206ENST00000474828 CDK1P06493 297 aa14.26□□□□□ -0.13
SCAF11-206ENST00000474828 HTR1AP08908 422 aa14.26□□□□□ -0.13
SCAF11-206ENST00000474828 ZNF12P17014 697 aa14.26□□□□□ -0.13
SCAF11-206ENST00000474828 MYL12AP19105 171 aa14.26□□□□□ -0.13
SCAF11-206ENST00000474828 PRDX4Q13162 271 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms