RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 MEGF10Q96KG7 1140 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 OR10A2Q9H208 303 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 OPA3Q9H6K4 179 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 NIPAL2Q9H841 368 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 GCM1Q9NP62 436 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 TMEM100Q9NV29 134 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 HAO2Q9NYQ3 351 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 KLHDC2Q9Y2U9 406 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 NOP16Q9Y3C1 178 aaKnown RBP12.72□□□□□ -0.37
VARS-223ENST00000474643 LRP12Q9Y561 859 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 DYSFO75923 2080 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 TANC2Q9HCD6 1990 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 PPIAL4EA0A075B759 164 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 PPIAL4CA0A0B4J2A2 164 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 PPIAL4DF5H284 164 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 TMEM178BH3BS89 294 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 PHYHO14832 338 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 ZNF205O95201 554 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 CYB5R3P00387 301 aaPredicted RBP12.71□□□□□ -0.37
VARS-223ENST00000474643 PPIAL4FP0DN26 164 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 GABRB1P18505 474 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 ZFP36P26651 326 aaKnown RBP12.71□□□□□ -0.37
VARS-223ENST00000474643 HTR1FP30939 366 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 CXCR4P61073 352 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 ZNF92Q03936 586 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 POU4F2Q12837 409 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 HNRNPA0Q13151 305 aaKnown RBP12.71□□□□□ -0.37
VARS-223ENST00000474643 MOGAT3Q86VF5 341 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 C8orf59Q8N0T1 100 aaPredicted RBP12.71□□□□□ -0.37
VARS-223ENST00000474643 OR52H1Q8NGJ2 320 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 ZNF420Q8TAQ5 688 aaPredicted RBP12.71□□□□□ -0.37
VARS-223ENST00000474643 MNTQ99583 582 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 TBX5Q99593 518 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 SSBP3Q9BWW4 388 aaPredicted RBP12.71□□□□□ -0.37
VARS-223ENST00000474643 ADGRL4Q9HBW9 690 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 GTF2A1LQ9UNN4 478 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 LRCH1Q9Y2L9 728 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 PPIAL4AQ9Y536 164 aa12.71□□□□□ -0.37
VARS-223ENST00000474643 CEACAM18A8MTB9 384 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 F5H5P2 479 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 DENRO43583 198 aaKnown RBP12.7□□□□□ -0.38
VARS-223ENST00000474643 APOL3O95236 402 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 MYF6P23409 242 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 CFL1P23528 166 aaKnown RBP12.7□□□□□ -0.38
VARS-223ENST00000474643 CFPP27918 469 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 RIDAP52758 137 aaKnown RBP12.7□□□□□ -0.38
VARS-223ENST00000474643 ISL1P61371 349 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 CSNK2BP67870 215 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 ZNF154Q13106 437 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 OR8G1Q15617 311 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 THAP5Q7Z6K1 395 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 COMMD2Q86X83 199 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 ENTHD1Q8IYW4 607 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 OR10H4Q8NGA5 316 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 OR8B3Q8NGG8 313 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 UBE2FQ969M7 185 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 REEP6Q96HR9 211 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 OR8B2Q96RD0 313 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 MS4A7Q9GZW8 240 aaPredicted RBP12.7□□□□□ -0.38
VARS-223ENST00000474643 CLN6Q9NWW5 311 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 MIOXQ9UGB7 285 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 OPN4Q9UHM6 478 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 NUP50Q9UKX7 468 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.7□□□□□ -0.38
VARS-223ENST00000474643 COPS3Q9UNS2 423 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 NBEAL1Q6ZS30 2694 aa12.7□□□□□ -0.38
VARS-223ENST00000474643 C5orf63A6NC05 138 aa12.69□□□□□ -0.38
VARS-223ENST00000474643 CD300LBA8K4G0 201 aa12.69□□□□□ -0.38
VARS-223ENST00000474643 ZNF254O75437 659 aa12.69□□□□□ -0.38
VARS-223ENST00000474643 HLA-DPB1P04440 258 aa12.69□□□□□ -0.38
VARS-223ENST00000474643 PSMA6P60900 246 aaKnown RBP12.69□□□□□ -0.38
VARS-223ENST00000474643 SEC61A1P61619 476 aaKnown RBP12.69□□□□□ -0.38
VARS-223ENST00000474643 ZNF829Q3KNS6 432 aaPredicted RBP12.69□□□□□ -0.38
VARS-223ENST00000474643 DEGS2Q6QHC5 323 aa12.69□□□□□ -0.38
VARS-223ENST00000474643 ZNF322Q6U7Q0 402 aaPredicted RBP12.69□□□□□ -0.38
VARS-223ENST00000474643 ZNF679Q8IYX0 411 aa12.69□□□□□ -0.38
VARS-223ENST00000474643 OR8B4Q96RC9 309 aa12.69□□□□□ -0.38
VARS-223ENST00000474643 SLC30A2Q9BRI3 323 aa12.69□□□□□ -0.38
VARS-223ENST00000474643 MMP26Q9NRE1 261 aa12.69□□□□□ -0.38
VARS-223ENST00000474643 LRRC42Q9Y546 428 aa12.69□□□□□ -0.38
VARS-223ENST00000474643 WNK2Q9Y3S1 2297 aa12.69□□□□□ -0.38
VARS-223ENST00000474643 TMEM269A0A1B0GVZ9 245 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 ANKRD30BLA7E2S9 258 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 H0YL77 283 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 ENTPD6O75354 484 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 KRT8P05787 483 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 ZNF12P17014 697 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 CA6P23280 308 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 RBMXP38159 391 aaKnown RBP12.68□□□□□ -0.38
VARS-223ENST00000474643 MTNR1AP48039 350 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 KCNJ8Q15842 424 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 EGFL6Q8IUX8 553 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 SIGLECL1Q8N7X8 197 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 DEFB108BQ8NET1 73 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 OR56B2PQ8NGI1 322 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 SGK3Q96BR1 496 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 NEIL1Q96FI4 390 aaPredicted RBP12.68□□□□□ -0.38
VARS-223ENST00000474643 SIGLEC11Q96RL6 698 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 ADAT1Q9BUB4 502 aaKnown RBP12.68□□□□□ -0.38
VARS-223ENST00000474643 SLC22A4Q9H015 551 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms