RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 KISS1Q15726 138 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 PLAC9Q5JTB6 97 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 SFRP5Q5T4F7 317 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 ZNF774Q6NX45 483 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 TMEM53Q6P2H8 277 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 COLCA1Q6ZS62 124 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 GALNTL5Q7Z4T8 443 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 TRAPPC6BQ86SZ2 158 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 ZNF584Q8IVC4 421 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 SKA3Q8IX90 412 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 ZNF101Q8IZC7 436 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 PNLDC1Q8NA58 520 aaKnown RBP8.56□□□□□ -1.04
USP39-214ENST00000474572 OR56B1Q8NGI3 324 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 GRPEL2Q8TAA5 225 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 FGFBP3Q8TAT2 258 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 DVL3Q92997 716 aaPredicted RBP8.56□□□□□ -1.04
USP39-214ENST00000474572 SPSB4Q96A44 273 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 SPSB1Q96BD6 273 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 CMBLQ96DG6 245 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 RADILQ96JH8 1075 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 SPACA5Q96QH8 159 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 GAL3ST1Q99999 423 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 URM1Q9BTM9 101 aaKnown RBP8.56□□□□□ -1.04
USP39-214ENST00000474572 TMEM59Q9BXS4 323 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 TINAGL1Q9GZM7 467 aaPredicted RBP8.56□□□□□ -1.04
USP39-214ENST00000474572 PRDM14Q9GZV8 571 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 RGCCQ9H4X1 137 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 BEX1Q9HBH7 125 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 SLC7A10Q9NS82 523 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 PARPBPQ9NWS1 579 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 B3GNT2Q9NY97 397 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 MGAT4CQ9UBM8 478 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 MCTS1Q9ULC4 181 aaKnown RBP8.56□□□□□ -1.04
USP39-214ENST00000474572 PIGLQ9Y2B2 252 aa8.56□□□□□ -1.04
USP39-214ENST00000474572 ARHGAP21Q5T5U3 1957 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 A0A1W2PP11 408 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 FAM166BA8MTA8 275 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 DISC1C4P0D8 188 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 H3BUI4 141 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 M0QYG6 137 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 SOCS1O15524 211 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 MRPL33O75394 65 aaKnown RBP8.55□□□□□ -1.04
USP39-214ENST00000474572 MPIG6BO95866 241 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 AMY2AP04746 511 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 CD46P15529 392 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 DNASE1P24855 282 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 ACKR3P25106 362 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 RFC3P40938 356 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 PTGFRP43088 359 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 HTR5AP47898 357 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 RAP2BP61225 183 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 PLGLB1Q02325 96 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 IKZF1Q13422 519 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 RNPS1Q15287 305 aaKnown RBP8.55□□□□□ -1.04
USP39-214ENST00000474572 OR8B8Q15620 311 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 MPPED2Q15777 294 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 GFOD2Q3B7J2 385 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 VAX1Q5SQQ9 334 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 ZBTB37Q5TC79 503 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 IGFL2Q6UWQ7 119 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 ASCL4Q6XD76 172 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 BPIFB2Q8N4F0 458 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 ZDHHC22Q8N966 263 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 DEFB124Q8NES8 71 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 STEAP2Q8NFT2 490 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 SEMA6DQ8NFY4 1073 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 OR2AK2Q8NG84 335 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 OR8S1Q8NH09 359 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 AKR7LQ8NHP1 331 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 ZNF431Q8TF32 576 aaPredicted RBP8.55□□□□□ -1.04
USP39-214ENST00000474572 CCDC107Q8WV48 283 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 ASB13Q8WXK3 278 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 MRGPRFQ96AM1 343 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 DACT3Q96B18 629 aaPredicted RBP8.55□□□□□ -1.04
USP39-214ENST00000474572 REEP6Q96HR9 211 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 SLC6A7Q99884 636 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 C1QTNF5Q9BXJ0 243 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 TMPRSS13Q9BYE2 586 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 SELENOIQ9C0D9 397 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 CST11Q9H112 138 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 ZNF552Q9H707 407 aaPredicted RBP8.55□□□□□ -1.04
USP39-214ENST00000474572 ZDHHC11Q9H8X9 412 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 ZMAT3Q9HA38 289 aaKnown RBP8.55□□□□□ -1.04
USP39-214ENST00000474572 GP6Q9HCN6 339 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 CA10Q9NS85 328 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 MGAT4AQ9UM21 535 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 KCNK7Q9Y2U2 307 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 ZNF318Q5VUA4 2279 aa8.55□□□□□ -1.04
USP39-214ENST00000474572 TNRC6AQ8NDV7 1962 aaKnown RBP8.54□□□□□ -1.04
USP39-214ENST00000474572 TMEM82A0PJX8 343 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 UBE2QL1A1L167 161 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 ARGFXA6NJG6 315 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 CEACAM18A8MTB9 384 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 AKR7A2O43488 359 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 XRCC2O43543 280 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 SS18L1O75177 396 aaPredicted RBP8.54□□□□□ -1.04
USP39-214ENST00000474572 FARS2O95363 451 aaKnown RBP8.54□□□□□ -1.04
USP39-214ENST00000474572 TPOP07202 933 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 LIPCP11150 499 aa8.54□□□□□ -1.04
USP39-214ENST00000474572 GNB3P16520 340 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms