RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 SELENOIQ9C0D9 397 aa7.15□□□□□ -1.26
CCDC93-208ENST00000474546 CHRNA10Q9GZZ6 450 aa7.15□□□□□ -1.26
CCDC93-208ENST00000474546 RYDENQ9NUL5 291 aaKnown RBP7.15□□□□□ -1.26
CCDC93-208ENST00000474546 FBXO34Q9NWN3 711 aa7.15□□□□□ -1.26
CCDC93-208ENST00000474546 PPP1R14DQ9NXH3 145 aa7.15□□□□□ -1.26
CCDC93-208ENST00000474546 GAR1Q9NY12 217 aaKnown RBP7.15□□□□□ -1.26
CCDC93-208ENST00000474546 DKK4Q9UBT3 224 aa7.15□□□□□ -1.26
CCDC93-208ENST00000474546 ZNF230Q9UIE0 474 aaPredicted RBP7.15□□□□□ -1.26
CCDC93-208ENST00000474546 ZNF346Q9UL40 294 aaKnown RBP7.15□□□□□ -1.26
CCDC93-208ENST00000474546 KLHDC2Q9Y2U9 406 aa7.15□□□□□ -1.26
CCDC93-208ENST00000474546 LRP12Q9Y561 859 aa7.15□□□□□ -1.26
CCDC93-208ENST00000474546 SCN3AQ9NY46 2000 aa7.15□□□□□ -1.27
CCDC93-208ENST00000474546 LRRK2Q5S007 2527 aa7.15□□□□□ -1.27
CCDC93-208ENST00000474546 A0A1W2PQU0 124 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 C7orf77A4D0Y5 90 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 ARGFXA6NJG6 315 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 LINC00587B1AMM8 73 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 M0R036 132 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 GPR137BO60478 399 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 SLC16A7O60669 478 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 SRSF10O75494 262 aaKnown RBP7.14□□□□□ -1.27
CCDC93-208ENST00000474546 DEDDO75618 318 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 NUDT14O95848 222 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 MBPP02686 304 aaPredicted RBP7.14□□□□□ -1.27
CCDC93-208ENST00000474546 GLAP06280 429 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 CTSDP07339 412 aaPredicted RBP7.14□□□□□ -1.27
CCDC93-208ENST00000474546 DANCRP0C864 163 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 CT45A8P0DMV1 189 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 CT45A9P0DMV2 189 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 ZNF44P15621 663 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 AMY2BP19961 511 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 CD80P33681 288 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 ZNF93P35789 620 aaPredicted RBP7.14□□□□□ -1.27
CCDC93-208ENST00000474546 P2RY1P47900 373 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 LSSP48449 732 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 PPT1P50897 306 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 ZNF84P51523 738 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 AFF3P51826 1226 aaKnown RBP7.14□□□□□ -1.27
CCDC93-208ENST00000474546 SLC26A5P58743 744 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 GUK1Q16774 197 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 AWAT1Q58HT5 328 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 CT45A2Q5DJT8 189 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 IGSF11Q5DX21 431 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 PRRT3Q5FWE3 981 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 HLA-DQA1Q5Y7H0 255 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 DHRS11Q6UWP2 260 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 CLEC18BQ6UXF7 455 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 Q6ZRG5 221 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 LHFPL1Q86WI0 220 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 GKN2Q86XP6 184 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 YAF2Q8IY57 180 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 FAM185AQ8N0U4 392 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 CARFQ8N187 725 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 LRTM2Q8N967 370 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 ZNF565Q8N9K5 539 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 ADPRHL1Q8NDY3 354 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 OR10G4Q8NGN3 311 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 RNF133Q8WVZ7 376 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 AHCTF1Q8WYP5 2266 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 MAFIPQ8WZ33 124 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 ST8SIA1Q92185 356 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 ARSGQ96EG1 525 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 GNPNAT1Q96EK6 184 aaPredicted RBP7.14□□□□□ -1.27
CCDC93-208ENST00000474546 MVB12AQ96EY5 273 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 SPG11Q96JI7 2443 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 SPIN2AQ99865 258 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 SPIN2BQ9BPZ2 258 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 MACROD1Q9BQ69 325 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 SYT3Q9BQG1 590 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 MESP1Q9BRJ9 268 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 GINS3Q9BRX5 216 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 TMEM59Q9BXS4 323 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 MBNL1Q9NR56 388 aaKnown RBP7.14□□□□□ -1.27
CCDC93-208ENST00000474546 TMEM242Q9NWH2 141 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 HCFC1R1Q9NWW0 138 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 RPH3AQ9Y2J0 694 aaPredicted RBP7.14□□□□□ -1.27
CCDC93-208ENST00000474546 TMED7Q9Y3B3 224 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 FAM96BQ9Y3D0 163 aa7.14□□□□□ -1.27
CCDC93-208ENST00000474546 PTRH2Q9Y3E5 179 aaKnown RBP7.14□□□□□ -1.27
CCDC93-208ENST00000474546 SPAG17Q6Q759 2223 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 LRBAP50851 2863 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 FLNCQ14315 2725 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 DUXBA0A1W2PPF3 345 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 FAM230AA0A1W2PPH8 454 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 MEIS3P1A6NDR6 274 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 PRR32B1ATL7 298 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 TMEM150CB9EJG8 249 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 ALG1L2C9J202 215 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 FAM157AC9JC47 383 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 NPIPA5E9PKD4 350 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 PSMD9O00233 223 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 CCSO14618 274 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 ZNF354AO60765 605 aaPredicted RBP7.13□□□□□ -1.27
CCDC93-208ENST00000474546 ALOX12BO75342 701 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 F13BP05160 661 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 HOXB5P09067 269 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 CT62P0C5K7 136 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 MMP9P14780 707 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 HOXA5P20719 270 aa7.13□□□□□ -1.27
CCDC93-208ENST00000474546 PTNP21246 168 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms