RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 FAM71F1Q96KD3 344 aaPredicted RBP17.6■□□□□ 0.41
TOP3A-204ENST00000472959 C18orf12Q96KH6 178 aa17.6■□□□□ 0.41
TOP3A-204ENST00000472959 COX4I2Q96KJ9 171 aa17.6■□□□□ 0.41
TOP3A-204ENST00000472959 ZNF184Q99676 751 aaPredicted RBP17.6■□□□□ 0.41
TOP3A-204ENST00000472959 PAPOLGQ9BWT3 736 aaKnown RBP17.6■□□□□ 0.41
TOP3A-204ENST00000472959 RASSF4Q9H2L5 321 aa17.6■□□□□ 0.41
TOP3A-204ENST00000472959 ISG20L2Q9H9L3 353 aaKnown RBP17.6■□□□□ 0.41
TOP3A-204ENST00000472959 ZNF275Q9NSD4 429 aaPredicted RBP17.6■□□□□ 0.41
TOP3A-204ENST00000472959 SCN3BQ9NY72 215 aa17.6■□□□□ 0.41
TOP3A-204ENST00000472959 MPC1Q9Y5U8 109 aa17.6■□□□□ 0.41
TOP3A-204ENST00000472959 A0A1B0GTI1 187 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 DHRS7CA6NNS2 312 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 P2RY10O00398 339 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 UBCP0CG48 685 aaKnown RBP17.59■□□□□ 0.41
TOP3A-204ENST00000472959 CCL1P22362 96 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 GATA4P43694 442 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 ETV1P50549 477 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 GBX2P52951 348 aaPredicted RBP17.59■□□□□ 0.41
TOP3A-204ENST00000472959 Q6ZSR3 168 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 ERGIC1Q969X5 290 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 SOX7Q9BT81 388 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 BPESC1Q9GZL8 116 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 FKBP14Q9NWM8 211 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 C14orf119Q9NWQ9 140 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 FRRS1LQ9P0K9 344 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 PPP1R3CQ9UQK1 317 aa17.59■□□□□ 0.41
TOP3A-204ENST00000472959 ZNF816-ZNF321PA0A0X1KG74 233 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 A0A1B0GVI7 797 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 ANXA2P2A6NMY6 339 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 PTBP3O95758 552 aaKnown RBP17.58■□□□□ 0.4
TOP3A-204ENST00000472959 RPSAP08865 295 aaKnown RBP17.58■□□□□ 0.4
TOP3A-204ENST00000472959 USF1P22415 310 aaPredicted RBP17.58■□□□□ 0.4
TOP3A-204ENST00000472959 GPR6P46095 362 aaPredicted RBP17.58■□□□□ 0.4
TOP3A-204ENST00000472959 LOXL1Q08397 574 aaPredicted RBP17.58■□□□□ 0.4
TOP3A-204ENST00000472959 MAB21L1Q13394 359 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 AHSA2Q719I0 299 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 CIARTQ8N365 385 aaPredicted RBP17.58■□□□□ 0.4
TOP3A-204ENST00000472959 STX19Q8N4C7 294 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 KLHL36Q8N4N3 616 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 OR8S1Q8NH09 359 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 Q9H521 79 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 GCM1Q9NP62 436 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 CACNG2Q9Y698 323 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 V9GYS6 101 aa17.58■□□□□ 0.4
TOP3A-204ENST00000472959 A0A096LNT2 108 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 CLDN25C9JDP6 229 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 SLC1A7O00341 560 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 PPIHO43447 177 aaKnown RBP17.57■□□□□ 0.4
TOP3A-204ENST00000472959 SYT7O43581 403 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 ISG15P05161 165 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 CCDC159P0C7I6 412 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 ZNF12P17014 697 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 KIR3DL2P43630 455 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 TGM4P49221 684 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 NANOS3P60323 173 aaKnown RBP17.57■□□□□ 0.4
TOP3A-204ENST00000472959 ALKBH1Q13686 389 aaKnown RBP17.57■□□□□ 0.4
TOP3A-204ENST00000472959 TMEM244Q5VVB8 128 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 OR14K1Q8NGZ2 314 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 OR52N1Q8NH53 320 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 MYDGFQ969H8 173 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 TIMD4Q96H15 378 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 TMEM106BQ9NUM4 274 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 ENPP5Q9UJA9 477 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 PIGLQ9Y2B2 252 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 TPRKBQ9Y3C4 175 aa17.57■□□□□ 0.4
TOP3A-204ENST00000472959 ZNF850A8MQ14 1090 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 INHBBP09529 407 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 PRDX4Q13162 271 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 ODF4Q2M2E3 257 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 ZNF181Q2M3W8 571 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 CCDC58Q4VC31 144 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 PEG10Q86TG7 708 aaKnown RBP17.56■□□□□ 0.4
TOP3A-204ENST00000472959 PIGCQ92535 297 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 RAB1CQ92928 201 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 CNBD2Q96M20 576 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 HIST1H2AAQ96QV6 131 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 MICU1Q9BPX6 476 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 TREM2Q9NZC2 230 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 CLEC2DQ9UHP7 191 aa17.56■□□□□ 0.4
TOP3A-204ENST00000472959 HIVEP1P15822 2718 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 LRRC30A6NM36 301 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 OR4C45A6NMZ5 311 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 PTGES3LE9PB15 166 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 SMAD7O15105 426 aaKnown RBP17.55■□□□□ 0.4
TOP3A-204ENST00000472959 C21orf33P30042 268 aaPredicted RBP17.55■□□□□ 0.4
TOP3A-204ENST00000472959 MVKQ03426 396 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 RNLSQ5VYX0 342 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 MOGAT3Q86VF5 341 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 ZDHHC23Q8IYP9 409 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 Q8TCH9 128 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 OR5P3Q8WZ94 311 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 HPS1Q92902 700 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 DVL3Q92997 716 aaPredicted RBP17.55■□□□□ 0.4
TOP3A-204ENST00000472959 ITPKCQ96DU7 683 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 RTL8AQ9BWD3 113 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 FN3KRPQ9HA64 309 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 BABAM2Q9NXR7 383 aa17.55■□□□□ 0.4
TOP3A-204ENST00000472959 F8P00451 2351 aa17.54■□□□□ 0.4
TOP3A-204ENST00000472959 LOC100289279A0A1B0GTE1 492 aa17.54■□□□□ 0.4
TOP3A-204ENST00000472959 LOC107986453A0A1B0GWG9 222 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms