RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 HMGN1P05114 100 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 SFTPBP07988 381 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 MUC1P15941 1255 aaPredicted RBP12.66□□□□□ -0.38
VTI1A-203ENST00000472892 HOXB6P17509 224 aaKnown RBP12.66□□□□□ -0.38
VTI1A-203ENST00000472892 PAICSP22234 425 aaKnown RBP12.66□□□□□ -0.38
VTI1A-203ENST00000472892 POU4F2Q12837 409 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 PLBD1Q6P4A8 553 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 Q6YL49 198 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 CSNK2A3Q8NEV1 391 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 OTOSQ8NHW6 89 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 OTULINQ96BN8 352 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 THTPAQ9BU02 230 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 SIRPDQ9H106 197 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 TLNRD1Q9H1K6 362 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 PPP1R3EQ9H7J1 279 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 ZNF696Q9H7X3 374 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 UNKLQ9H9P5 680 aaKnown RBP12.66□□□□□ -0.38
VTI1A-203ENST00000472892 DNAJC27Q9NZQ0 273 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 PDP1Q9P0J1 537 aaPredicted RBP12.66□□□□□ -0.38
VTI1A-203ENST00000472892 RHBDD3Q9Y3P4 386 aa12.66□□□□□ -0.38
VTI1A-203ENST00000472892 IGHV3OR15-7A0A075B7D8 119 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 PRR23D1E9PI22 279 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-203ENST00000472892 GNGT2O14610 69 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 H2BFMP0C1H6 154 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 PRR23D2P0DMB1 279 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-203ENST00000472892 OSMP13725 252 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 POU1F1P28069 291 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 CDK5Q00535 292 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 SNCBQ16143 134 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 MICBQ29980 383 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 WDR82Q6UXN9 313 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 BTN2A1Q7KYR7 527 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.65□□□□□ -0.38
VTI1A-203ENST00000472892 GALNT4Q8N4A0 578 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 LRRC29Q8WV35 223 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 TAF15Q92804 592 aaKnown RBP eCLIP12.65□□□□□ -0.38
VTI1A-203ENST00000472892 ITPKCQ96DU7 683 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 PGAM5Q96HS1 289 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 KIF17Q9P2E2 1029 aa12.65□□□□□ -0.38
VTI1A-203ENST00000472892 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.64□□□□□ -0.39
VTI1A-203ENST00000472892 PRODHO43272 600 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 LYNP07948 512 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 GNALP38405 381 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 NAA10P41227 235 aaPredicted RBP12.64□□□□□ -0.39
VTI1A-203ENST00000472892 CSNK2BP67870 215 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 PDCD1Q15116 288 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 GFOD2Q3B7J2 385 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 METTL11BQ5VVY1 283 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 RUSC1-AS1Q66K80 236 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 CPOQ8IVL8 374 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 FTMTQ8N4E7 242 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 THEM6Q8WUY1 208 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 TMIGD2Q96BF3 282 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 C12orf43Q96C57 262 aaKnown RBP12.64□□□□□ -0.39
VTI1A-203ENST00000472892 FAM71F1Q96KD3 344 aaPredicted RBP12.64□□□□□ -0.39
VTI1A-203ENST00000472892 CNTD2Q9H8S5 307 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 BRD7Q9NPI1 651 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 MMP24Q9Y5R2 645 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 MPC1Q9Y5U8 109 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 MGAM2Q2M2H8 2515 aa12.64□□□□□ -0.39
VTI1A-203ENST00000472892 IGHV1-69DA0A0B4J2H0 117 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 CDIPTO14735 213 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 SELENOFO60613 162 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 CST4P01036 141 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 IGHV1-69P01742 117 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 ANXA8P13928 327 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 PRKACGP22612 351 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 SLC2A5P22732 501 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 ARF6P62330 175 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 ELF3P78545 371 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-203ENST00000472892 IL5RAQ01344 420 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 FAM76BQ5HYJ3 339 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 WDR38Q5JTN6 314 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 SLC35D3Q5M8T2 416 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 ATPAF1Q5TC12 328 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-203ENST00000472892 HS3ST5Q8IZT8 346 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 TMEM86BQ8N661 226 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 LY6G5BQ8NDX9 201 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 GATAD2BQ8WXI9 593 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 DMRTB1Q96MA1 342 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 CCL13Q99616 98 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 MICU1Q9BPX6 476 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 PAPOLGQ9BWT3 736 aaKnown RBP12.63□□□□□ -0.39
VTI1A-203ENST00000472892 SLITRK2Q9H156 845 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 ZNF556Q9HAH1 456 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 ACOXLQ9NUZ1 547 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 RPUSD1Q9UJJ7 312 aaKnown RBP12.63□□□□□ -0.39
VTI1A-203ENST00000472892 TRRAPQ9Y4A5 3859 aa12.63□□□□□ -0.39
VTI1A-203ENST00000472892 A0A1B0GW55 424 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 FAM181BA6NEQ2 426 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 ANXA2P2A6NMY6 339 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 E2F6O75461 281 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 MELTFP08582 738 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 DUX4L2P0CJ85 424 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 DUX4L3P0CJ86 424 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 DUX4L4P0CJ87 422 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 DUX4L5P0CJ88 424 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 DUX4L6P0CJ89 424 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 DUX4L7P0CJ90 424 aa12.62□□□□□ -0.39
VTI1A-203ENST00000472892 AMY2BP19961 511 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms