RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 DUSP7Q16829 419 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 SLC36A3Q495N2 470 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 AGKQ53H12 422 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 KLF17Q5JT82 389 aaPredicted RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 PAGE3Q5JUK9 113 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 NCR3LG1Q68D85 454 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 ZNF774Q6NX45 483 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 SLC25A47Q6Q0C1 308 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 METAP1DQ6UB28 335 aaPredicted RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 ZNF730Q6ZMV8 503 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 Q6ZTK2 550 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 PGAP1Q75T13 922 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 ZNF771Q7L3S4 317 aaPredicted RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 SLC36A1Q7Z2H8 476 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 MSRB3Q8IXL7 192 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 KIR3DL3Q8N743 410 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 OR2T12Q8NG77 320 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 OR4S1Q8NGB4 309 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 OR4C13Q8NGP0 309 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 OR1F12Q8NHA8 337 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 AKR7LQ8NHP1 331 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 FGFBP3Q8TAT2 258 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 TMEM255BQ8WV15 326 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 SPRYD4Q8WW59 207 aaPredicted RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 ITLN1Q8WWA0 313 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 ACOT11Q8WXI4 607 aaPredicted RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 HDAC2Q92769 488 aaKnown RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 SPTSSAQ969W0 71 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 TAMM41Q96BW9 452 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 C12orf43Q96C57 262 aaKnown RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 CMBLQ96DG6 245 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 C1orf147Q96MC9 270 aaPredicted RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 TECTBQ96PL2 329 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 DUX5Q96PT3 197 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 HIST1H2AAQ96QV6 131 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 SIGLEC11Q96RL6 698 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 GPX7Q96SL4 187 aaPredicted RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 PKP2Q99959 881 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 RBM4BQ9BQ04 359 aaKnown RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 PCGF1Q9BSM1 259 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 DPCDQ9BVM2 203 aaPredicted RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 FNDC11Q9BVV2 318 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 WNT5BQ9H1J7 359 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 RANBP3Q9H6Z4 567 aaPredicted RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 SP140LQ9H930 580 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 ABCB9Q9NP78 766 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 MEPEQ9NQ76 525 aaPredicted RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.9□□□□□ -1.95
XRN1-209ENST00000472625 MMP26Q9NRE1 261 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 TMEM100Q9NV29 134 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 GID8Q9NWU2 228 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 MRPL15Q9P015 296 aaKnown RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 RIMS3Q9UJD0 308 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 RPS6KA6Q9UK32 745 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 VPREB3Q9UKI3 123 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 RAB21Q9UL25 225 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 KPTNQ9Y664 436 aa2.9□□□□□ -1.95
XRN1-209ENST00000472625 KMT2CQ8NEZ4 4911 aaKnown RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 HEATR1Q9H583 2144 aaKnown RBP2.9□□□□□ -1.95
XRN1-209ENST00000472625 YLPM1P49750 1951 aaKnown RBP2.89□□□□□ -1.95
XRN1-209ENST00000472625 IGHV1-69DA0A0B4J2H0 117 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 A0A1B0GWJ7 208 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 hCG_1809904A0A1W2PP81 198 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 A0A1W2PPE2 198 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 A0A1W2PR64 198 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 A0A1W2PRV1 198 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 ANKRD61A6NGH8 418 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 OOEPA6NGQ2 149 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 NKX6-3A6NJ46 265 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 FAM220BPB1ANY3 271 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 RNASEK-C17orf49H0YIS7 233 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 LGALS8O00214 317 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 SLC22A2O15244 555 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 PIP5K1CO60331 668 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 GPR137BO60478 399 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 NDUFB2O95178 105 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 RENP00797 406 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 TGP01266 2768 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 IGHV1-69P01742 117 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 APOC1P02654 83 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 MELTFP08582 738 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 TROVE2P10155 538 aaKnown RBP eCLIP2.89□□□□□ -1.95
XRN1-209ENST00000472625 MUC1P15941 1255 aaPredicted RBP2.89□□□□□ -1.95
XRN1-209ENST00000472625 GABRA5P31644 462 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 CFHR2P36980 270 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 DDOSTP39656 456 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 PSMB10P40306 273 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 NAA10P41227 235 aaPredicted RBP2.89□□□□□ -1.95
XRN1-209ENST00000472625 SLC7A2P52569 658 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 BLVRAP53004 296 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 SMIM11AP58511 58 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 FGF12P61328 243 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 SEC61A1P61619 476 aaKnown RBP2.89□□□□□ -1.95
XRN1-209ENST00000472625 SELENOWP63302 87 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 PAX2Q02962 417 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 PRKCDQ05655 676 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 ACSM1Q08AH1 577 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 COX10Q12887 443 aa2.89□□□□□ -1.95
XRN1-209ENST00000472625 KRR1Q13601 381 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms