RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 RSPO1Q2MKA7 263 aaPredicted RBP5.54□□□□□ -1.52
HDAC1-204ENST00000471488 RFX4Q33E94 735 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 C11orf91Q3C1V1 193 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 STUMQ69YW2 141 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 HCP5Q6MZN7 132 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 TBPL2Q6SJ96 375 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 C10orf99Q6UWK7 81 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 WDR82Q6UXN9 313 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 PTCHD4Q6ZW05 846 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 TSEN54Q7Z6J9 526 aaKnown RBP5.54□□□□□ -1.52
HDAC1-204ENST00000471488 MRPL41Q8IXM3 137 aaKnown RBP5.54□□□□□ -1.52
HDAC1-204ENST00000471488 ZNRF1Q8ND25 227 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 OR1M1Q8NGA1 313 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 OR4M1Q8NGD0 313 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 OR51D1Q8NGF3 324 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 RPL3LQ92901 407 aaKnown RBP5.54□□□□□ -1.52
HDAC1-204ENST00000471488 MED30Q96HR3 178 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 FAM46AQ96IP4 442 aaKnown RBP5.54□□□□□ -1.52
HDAC1-204ENST00000471488 GAFA1Q96PS6 74 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 CGREF1Q99674 301 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 EBF4Q9BQW3 602 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 COPS4Q9BT78 406 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 PAPOLGQ9BWT3 736 aaKnown RBP5.54□□□□□ -1.52
HDAC1-204ENST00000471488 FN3KQ9H479 309 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 PPP1R3EQ9H7J1 279 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 NMNAT1Q9HAN9 279 aaPredicted RBP5.54□□□□□ -1.52
HDAC1-204ENST00000471488 CENPMQ9NSP4 180 aa5.54□□□□□ -1.52
HDAC1-204ENST00000471488 MRPL15Q9P015 296 aaKnown RBP5.54□□□□□ -1.52
HDAC1-204ENST00000471488 A0A1B0GWJ7 208 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 hCG_1809904A0A1W2PP81 198 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 A0A1W2PPE2 198 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 A0A1W2PPH5 198 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 A0A1W2PR64 198 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 A0A1W2PRV1 198 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 TMEM120BA0PK00 339 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 A6NDX4 124 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 DCTN6O00399 190 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 CDC42EP2O14613 210 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 AHCYL1O43865 530 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 SASH3O75995 380 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 NDUFB2O95178 105 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 RENP00797 406 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 IGF2P01344 180 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 IFNA14P01570 189 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 ANXA2P07355 339 aaKnown RBP5.53□□□□□ -1.52
HDAC1-204ENST00000471488 ZNF823P16415 610 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 CCL3L1P16619 93 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 CD24P25063 80 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 NOS3P29474 1203 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 CRABP1P29762 137 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 ECI1P42126 302 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 CDKN2AP42771 156 aaKnown RBP5.53□□□□□ -1.52
HDAC1-204ENST00000471488 RPS6KA3P51812 740 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 OR12D2P58182 307 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 VSNL1P62760 191 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 PRKCDQ05655 676 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 TRAM2Q15035 370 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 VMACQ2NL98 169 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 SLC36A3Q495N2 470 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 NKAPLQ5M9Q1 402 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 AGBL2Q5U5Z8 902 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 SLC18B1Q6NT16 456 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 PGM2L1Q6PCE3 622 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 DLEU7Q6UYE1 221 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 PIGWQ7Z7B1 504 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 WDR86Q86TI4 376 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 DYNAPQ8N1N2 210 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 LINC00482Q8N8I6 264 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 EIF1ADQ8N9N8 165 aaKnown RBP5.53□□□□□ -1.52
HDAC1-204ENST00000471488 NDNFQ8TB73 568 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 PIFOQ8TCI5 191 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 AJUBAQ96IF1 538 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 PRRC1Q96M27 445 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 DMRTB1Q96MA1 342 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 ERMAPQ96PL5 475 aaPredicted RBP5.53□□□□□ -1.52
HDAC1-204ENST00000471488 RCHY1Q96PM5 261 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 DUX3Q96PT4 197 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 MICU1Q9BPX6 476 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 MCRIP2Q9BUT9 160 aaKnown RBP5.53□□□□□ -1.52
HDAC1-204ENST00000471488 POLR2J2Q9GZM3 115 aaKnown RBP5.53□□□□□ -1.52
HDAC1-204ENST00000471488 WNT10AQ9GZT5 417 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 POLR2J3Q9H1A7 115 aaKnown RBP5.53□□□□□ -1.52
HDAC1-204ENST00000471488 C1orf21Q9H246 121 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 YY1AP1Q9H869 796 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 RNPEPL1Q9HAU8 725 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 BRD7Q9NPI1 651 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 RPRD1BQ9NQG5 326 aaKnown RBP5.53□□□□□ -1.52
HDAC1-204ENST00000471488 C19orf12Q9NSK7 152 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 NKIRAS1Q9NYS0 192 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 ZMAT5Q9UDW3 170 aaKnown RBP5.53□□□□□ -1.52
HDAC1-204ENST00000471488 A4GNTQ9UNA3 340 aa5.53□□□□□ -1.52
HDAC1-204ENST00000471488 TVP23AA6NH52 213 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 ANXA2P2A6NMY6 339 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 OR2AT4A6NND4 320 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 H0YHG0 523 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.52□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF682O95780 498 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 AMY2BP19961 511 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 ANOS1P23352 680 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 GLRA1P23415 457 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms