RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 HKR1P10072 659 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 SLC2A5P22732 501 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 SLC9A3R2Q15599 337 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 DEFB112Q30KQ8 113 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 C9orf139Q6ZV77 190 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 SHFQ7M4L6 423 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 OR1M1Q8NGA1 313 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 LRRC29Q8WV35 223 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 PGAM5Q96HS1 289 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 TBX15Q96SF7 602 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 PCGF1Q9BSM1 259 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 PAPOLGQ9BWT3 736 aaKnown RBP12.73□□□□□ -0.37
COL1A1-203ENST00000471344 TTTY10Q9BZA0 68 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 PCDHGB1Q9Y5G3 927 aa12.73□□□□□ -0.37
COL1A1-203ENST00000471344 MEGF8Q7Z7M0 2845 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 CMYA5Q8N3K9 4069 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 TRAV38-1A0A0B4J264 116 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 PSMD9O00233 223 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 ENSAO43768 121 aaKnown RBP12.72□□□□□ -0.37
COL1A1-203ENST00000471344 TIPRLO75663 272 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 ATP5HO75947 161 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 RNASE1P07998 156 aaKnown RBP12.72□□□□□ -0.37
COL1A1-203ENST00000471344 MRPL3P09001 348 aaKnown RBP12.72□□□□□ -0.37
COL1A1-203ENST00000471344 MMP9P14780 707 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 CFHR2P36980 270 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 DDOSTP39656 456 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 GMFBP60983 142 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 APOFQ13790 326 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 WDR82Q6UXN9 313 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 SPERTQ8NA61 448 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 PAPD5Q8NDF8 572 aaKnown RBP12.72□□□□□ -0.37
COL1A1-203ENST00000471344 OR8B12Q8NGG6 310 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 OR52H1Q8NGJ2 320 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 ITPKCQ96DU7 683 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 OR10A2Q9H208 303 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 ZNF556Q9HAH1 456 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 SLC25A19Q9HC21 320 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 C14orf119Q9NWQ9 140 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 ERVK-18Q9QC07 812 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 DNAJB9Q9UBS3 223 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 LRP12Q9Y561 859 aa12.72□□□□□ -0.37
COL1A1-203ENST00000471344 CCDC182A6NF36 153 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 DVL1O14640 695 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 PRODHO43272 600 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 SELLP14151 372 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 DAPP51397 102 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 RPS7P62081 194 aaKnown RBP12.71□□□□□ -0.37
COL1A1-203ENST00000471344 DMRTC1Q5HYR2 192 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 WDR38Q5JTN6 314 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 TEX36Q5VZQ5 186 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 CCDC121Q6ZUS5 278 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 BTN2A1Q7KYR7 527 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 RHOUQ7L0Q8 258 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 BCDIN3DQ7Z5W3 292 aaKnown RBP12.71□□□□□ -0.37
COL1A1-203ENST00000471344 FAM216BQ8N7L0 139 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 HPSE2Q8WWQ2 592 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 ST8SIA4Q92187 359 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 CCL13Q99616 98 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 YY1AP1Q9H869 796 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 TNFRSF19Q9NS68 423 aa12.71□□□□□ -0.37
COL1A1-203ENST00000471344 ZNF850A8MQ14 1090 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 ZNF879B4DU55 563 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 CDIPTO14735 213 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 TMPRSS2O15393 492 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 HOXA3O43365 443 aaPredicted RBP12.7□□□□□ -0.38
COL1A1-203ENST00000471344 APOC1P02654 83 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 HMGN1P05114 100 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 ANXA8P13928 327 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 AMY2BP19961 511 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 GNALP38405 381 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 NPY4RP50391 375 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 PSMA6P60900 246 aaKnown RBP12.7□□□□□ -0.38
COL1A1-203ENST00000471344 PRB3Q04118 309 aaPredicted RBP12.7□□□□□ -0.38
COL1A1-203ENST00000471344 PRDX4Q13162 271 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 KCNJ8Q15842 424 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.7□□□□□ -0.38
COL1A1-203ENST00000471344 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 RPL3LQ92901 407 aaKnown RBP12.7□□□□□ -0.38
COL1A1-203ENST00000471344 WDR13Q9H1Z4 485 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 TVP23BQ9NYZ1 205 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 COPS3Q9UNS2 423 aa12.7□□□□□ -0.38
COL1A1-203ENST00000471344 CENPVL3A0A0U1RRI6 287 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 PRKYO43930 277 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 MITFO75030 526 aaPredicted RBP12.69□□□□□ -0.38
COL1A1-203ENST00000471344 TOX4O94842 621 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 ALOX5APP20292 161 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 OMGP23515 440 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 CFL1P23528 166 aaKnown RBP12.69□□□□□ -0.38
COL1A1-203ENST00000471344 EPHA2P29317 976 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 MTNR1AP48039 350 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 RASSF2P50749 326 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 DLX1P56177 255 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 ARF6P62330 175 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 MZT1Q08AG7 82 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 SNAPC1Q16533 368 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 SLC35D3Q5M8T2 416 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 GPR157Q5UAW9 335 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 C1orf146Q5VVC0 180 aa12.69□□□□□ -0.38
COL1A1-203ENST00000471344 FAHD1Q6P587 224 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms