RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 IFITM10A6NMD0 228 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 DHRS3O75911 302 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 HRH1P35367 487 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 LBX1P52954 281 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 RPL27P61353 136 aaKnown RBP6.25□□□□□ -1.41
BRCA1-210ENST00000471181 PPP1CAP62136 330 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 TMEM81Q6P7N7 255 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 CARFQ8N187 725 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 EXD3Q8N9H8 876 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 GPR150Q8NGU9 434 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 PRR14Q9BWN1 585 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 PLEKHA2Q9HB19 425 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 LTB4R2Q9NPC1 389 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 MEX3AA1L020 520 aaKnown RBP6.25□□□□□ -1.41
BRCA1-210ENST00000471181 G3V2L1 256 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 M0R296 226 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 GEMIN2O14893 280 aaKnown RBP6.25□□□□□ -1.41
BRCA1-210ENST00000471181 RGS13O14921 159 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 CST7O76096 145 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 GPANK1O95872 356 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 CTSAP10619 480 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 RPS19P39019 145 aaKnown RBP6.25□□□□□ -1.41
BRCA1-210ENST00000471181 TCL1AP56279 114 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 TIAL1Q01085 375 aaKnown RBP eCLIP6.25□□□□□ -1.41
BRCA1-210ENST00000471181 FUT2Q10981 343 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 TRAT1Q6PIZ9 186 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 GFRALQ6UXV0 394 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 BPIFA4PQ86YQ2 179 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 ARFGAP1Q8N6T3 406 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 OR5R1Q8NH85 324 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 GPR61Q9BZJ8 451 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 CLMPQ9H6B4 373 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 TMEM9BQ9NQ34 198 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 PRSS16Q9NQE7 514 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 C20orf141Q9NUB4 165 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 FAM90A27PA6NNH2 459 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 TCF21O43680 179 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 KLF7O75840 302 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-210ENST00000471181 ACTL6AO96019 429 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 NMUP48645 174 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 RRN3P1Q2M238 152 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 SMIM21Q3B7S5 101 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 TP53INP2Q8IXH6 220 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 TMEM102Q8N9M5 508 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-210ENST00000471181 PTX4Q96A99 478 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF385DQ9H6B1 395 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 FLVCR2Q9UPI3 526 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 IGKV3D-15A0A087WSY6 115 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 IGKV3OR2-268A0A0C4DH90 116 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 LOC389332A0A1B0GUA5 103 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 IGKV3-15P01624 115 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 OR4A8P0C604 315 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 IQCF3P0C7M6 154 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 AGBL4Q5VU57 503 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 OR2Z1Q8NG97 314 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 RTN4IP1Q8WWV3 396 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-210ENST00000471181 C12orf42Q96LP6 360 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 PAAF1Q9BRP4 392 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 TXLNGYQ9BZA5 131 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 RABAC1Q9UI14 185 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 HSPB8Q9UJY1 196 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 THSD7AQ9UPZ6 1657 aa6.25□□□□□ -1.41
BRCA1-210ENST00000471181 CDC14BO60729 498 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 LIMS3P0CW19 117 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 LIMS4P0CW20 117 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 WNT3P56703 355 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 SLC35D3Q5M8T2 416 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 ELFN2Q5R3F8 820 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 VGLL2Q8N8G2 317 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 OR4S1Q8NGB4 309 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 OR1L6Q8NGR2 347 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 MARCH1Q8TCQ1 289 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 NUDCD2Q8WVJ2 157 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 EDAQ92838 391 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 C2orf50Q96LR7 162 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 GPA33Q99795 319 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 CLEC1BQ9P126 229 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 DIMT1Q9UNQ2 313 aaKnown RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 CORINQ9Y5Q5 1042 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 IGHV3OR16-12A0A075B7B8 117 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 IGKV3D-11A0A0A0MRZ8 115 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 A0A1B0GUH1 482 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 FCGR3BO75015 233 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 IGKV3-11P04433 115 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 ALPLP05186 524 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 DGCR2P98153 550 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 GABRA6Q16445 453 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 HIST3H3Q16695 136 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 OR2A2Q6IF42 318 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 OR4A47Q6IF82 309 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 OLIG3Q7RTU3 272 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 OR52N4Q8NGI2 321 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 EXTL1Q92935 676 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 NEURL2Q9BR09 285 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 ZNF426Q9BUY5 554 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 IFT22Q9H7X7 185 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 HOXC11O43248 304 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 SNNO75324 88 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-210ENST00000471181 COX6CP09669 75 aa6.24□□□□□ -1.41
BRCA1-210ENST00000471181 FAHP16930 419 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms