RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 PSMB7Q99436 277 aa3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 SORT1Q99523 831 aa3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 TSNAXQ99598 290 aaKnown RBP3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 APOL4Q9BPW4 351 aa3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 DDA1Q9BW61 102 aa3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 CHIAQ9BZP6 476 aa3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 ZNF430Q9H8G1 570 aaPredicted RBP3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 MOB1AQ9H8S9 216 aa3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 ACOT13Q9NPJ3 140 aa3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 FBXO6Q9NRD1 293 aaPredicted RBP3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 IMPAD1Q9NX62 359 aa3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 TAS2R16Q9NYV7 291 aa3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 NDRG2Q9UN36 371 aaKnown RBP3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 NDUFAF1Q9Y375 327 aa3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 RPL36Q9Y3U8 105 aaKnown RBP3.6□□□□□ -1.83
PRPF40A-206ENST00000471167 SCRIBQ14160 1630 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 TINCRA0A1B0GVN0 87 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ISPDA4D126 451 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 LYRM9A8MSI8 78 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 C11orf98E9PRG8 122 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 LAD1O00515 517 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 AZIN1O14977 448 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 UBDO15205 165 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 MRPS12O15235 138 aaKnown RBP3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 CRXO43186 299 aaPredicted RBP3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ENTPD6O75354 484 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 DCTN3O75935 186 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 FGF1P05230 155 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 SLC2A5P22732 501 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 F8A1P23610 371 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 GDF1P27539 372 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 LOXP28300 417 aaPredicted RBP3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 GRPRP30550 384 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 SHMT2P34897 504 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ELK3P41970 407 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ACOT2P49753 483 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 CRYBA2P53672 197 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 FGF8P55075 233 aaPredicted RBP3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 TFAMQ00059 246 aaKnown RBP3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 CD164Q04900 197 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 TFDP2Q14188 446 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 POU6F1Q14863 301 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ZBED5Q49AG3 693 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 NHLRC3Q5JS37 347 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 FAM120AOSQ5T036 256 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 C1orf146Q5VVC0 180 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 PVRIGQ6DKI7 326 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 DHRS4L2Q6PKH6 230 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 TMEM179Q6ZVK1 233 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 PHF13Q86YI8 300 aaPredicted RBP3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 SLC34A3Q8N130 599 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ATPAF2Q8N5M1 289 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 OR8G5Q8NG78 346 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 OR10W1Q8NGF6 305 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 OR6K3Q8NGY3 331 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 OR6F1Q8NGZ6 308 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 RHOXF1Q8NHV9 184 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 CASTOR1Q8WTX7 329 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 RNF138Q8WVD3 245 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 TRUB1Q8WWH5 349 aaKnown RBP3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 RERGQ96A58 199 aaPredicted RBP3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 EEF1AKMT3Q96AZ1 226 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ZNF681Q96N22 645 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 RBP7Q96R05 134 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 TBX15Q96SF7 602 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 AGMATQ9BSE5 352 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 SIAEQ9HAT2 523 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 PLEKHA3Q9HB20 300 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ELL3Q9HB65 397 aaPredicted RBP3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ADGRL4Q9HBW9 690 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 DEPPQ9NTK1 212 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 GIN1Q9NXP7 522 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 IL17CQ9P0M4 197 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 Q9UF83 564 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 GNPTGQ9UJJ9 305 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ZNF391Q9UJN7 358 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 KLHL21Q9UJP4 597 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ING4Q9UNL4 249 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ASF1AQ9Y294 204 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 NTNG1Q9Y2I2 539 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 GOLT1BQ9Y3E0 138 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 MSH6P52701 1360 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 ABCC11Q96J66 1382 aa3.59□□□□□ -1.83
PRPF40A-206ENST00000471167 IQCMA0A1B0GVH7 501 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 ZNF233A6NK53 670 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 ANKRD63C9JTQ0 380 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 KCNK1O00180 336 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 ERI3O43414 337 aaKnown RBP3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 UGT1A9O60656 530 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 SLC16A7O60669 478 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 DPM1O60762 260 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 NOS1APO75052 506 aaPredicted RBP3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 IGHV2-5P01817 119 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 MT-ND4P03905 459 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 CD74P04233 296 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 NBEAP1P0C6P0 100 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 OR8U9P0C7N5 309 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 ZDHHC11BP0C7U3 371 aa3.58□□□□□ -1.84
PRPF40A-206ENST00000471167 PVRP15151 417 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms