RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 GRPP07492 148 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 OR2T7P0C7T2 308 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 SEC61A1P61619 476 aaKnown RBP11.84□□□□□ -0.51
TOP3B-215ENST00000470338 SNRPGP62308 76 aaKnown RBP11.84□□□□□ -0.51
TOP3B-215ENST00000470338 ZNF829Q3KNS6 432 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-215ENST00000470338 C1orf229Q6ZS94 237 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-215ENST00000470338 C11orf53Q8IXP5 236 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 GALNT4Q8N4A0 578 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 FTMTQ8N4E7 242 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 OR4M2Q8NGB6 313 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 OR2T27Q8NH04 317 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 OR8S1Q8NH09 359 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 ITPKCQ96DU7 683 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 MBOAT4Q96T53 435 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 TMPRSS13Q9BYE2 586 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 C1orf123Q9NWV4 160 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 IMPAD1Q9NX62 359 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 MIOXQ9UGB7 285 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 MRM2Q9UI43 246 aaKnown RBP11.84□□□□□ -0.51
TOP3B-215ENST00000470338 LRCH1Q9Y2L9 728 aa11.84□□□□□ -0.51
TOP3B-215ENST00000470338 TRAPPC2LH3BP13 241 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 LHBP01229 141 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 ATP6V1B1P15313 513 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 SRP14P37108 136 aaKnown RBP11.83□□□□□ -0.52
TOP3B-215ENST00000470338 GNALP38405 381 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 MAP2K3P46734 347 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 IL5RAQ01344 420 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 MFGE8Q08431 387 aaPredicted RBP11.83□□□□□ -0.52
TOP3B-215ENST00000470338 OCLNQ16625 522 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 ZNF684Q5T5D7 378 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 DCAF12L2Q5VW00 463 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 ZBTB49Q6ZSB9 765 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 ZNF826PQ6ZT77 177 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 SSX6Q7RTT6 188 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 WDR86Q86TI4 376 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 OR1M1Q8NGA1 313 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 PPP1R14AQ96A00 147 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 MDFIQ99750 246 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 PAPOLGQ9BWT3 736 aaKnown RBP11.83□□□□□ -0.52
TOP3B-215ENST00000470338 TLNRD1Q9H1K6 362 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 ABCB9Q9NP78 766 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 R4GMQ9 66 aa11.83□□□□□ -0.52
TOP3B-215ENST00000470338 A0A1W2PQL4 384 aaPredicted RBP11.82□□□□□ -0.52
TOP3B-215ENST00000470338 ZNF850A8MQ14 1090 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 LGALS8O00214 317 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 TNFRSF13BO14836 293 aaPredicted RBP11.82□□□□□ -0.52
TOP3B-215ENST00000470338 ENTPD6O75354 484 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 TTRP02766 147 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 RPS2P15880 293 aaKnown RBP11.82□□□□□ -0.52
TOP3B-215ENST00000470338 CFHR2P36980 270 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 PSMB10P40306 273 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 HOXA4Q00056 320 aaPredicted RBP11.82□□□□□ -0.52
TOP3B-215ENST00000470338 ZNF154Q13106 437 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 PRDX4Q13162 271 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 ESCO2Q56NI9 601 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 FAM76BQ5HYJ3 339 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 MEDAGQ5VYS4 303 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 DCDC5Q6ZRR9 648 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 ELMOD2Q8IZ81 293 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 GCSAMQ8N6F7 178 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 TEX29Q8N6K0 151 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 C19orf18Q8NEA5 215 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 OR51E1Q8TCB6 317 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 OR5P3Q8WZ94 311 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 PIGCQ92535 297 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 NEIL1Q96FI4 390 aaPredicted RBP11.82□□□□□ -0.52
TOP3B-215ENST00000470338 TBX5Q99593 518 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 MICU1Q9BPX6 476 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 MOB1AQ9H8S9 216 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 RNPEPL1Q9HAU8 725 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 GPR84Q9NQS5 396 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 MMP26Q9NRE1 261 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 OPN4Q9UHM6 478 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.82□□□□□ -0.52
TOP3B-215ENST00000470338 GMPPBQ9Y5P6 360 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 SNX5Q9Y5X3 404 aa11.82□□□□□ -0.52
TOP3B-215ENST00000470338 ZNF816-ZNF321PA0A0X1KG74 233 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 METTL15A6NJ78 407 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 A6NLC8 198 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 ANXA2P2A6NMY6 339 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 LOC110117498-PIK3R3F6TDL0 507 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 PHF1O43189 567 aaPredicted RBP11.81□□□□□ -0.52
TOP3B-215ENST00000470338 SULT1C4O75897 302 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 APOL3O95236 402 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 BAG2O95816 211 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 KRT8P05787 483 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 ZNF12P17014 697 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 GABRB1P18505 474 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 ATP6V1E1P36543 226 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 MTNR1AP48039 350 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 PAX2Q02962 417 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 RIPPLY1Q0D2K3 151 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 ZBTB37Q5TC79 503 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 LYPD2Q6UXB3 125 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 WDR82Q6UXN9 313 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 ZNF841Q6ZN19 808 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 PLEKHG7Q6ZR37 379 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 Q6ZSR3 168 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 DEFB108BQ8NET1 73 aa11.81□□□□□ -0.52
TOP3B-215ENST00000470338 OR10H4Q8NGA5 316 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms