RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 NANPQ8TBE9 248 aa5.31□□□□□ -1.56
SHQ1-205ENST00000468371 GMPPAQ96IJ6 420 aaPredicted RBP5.31□□□□□ -1.56
SHQ1-205ENST00000468371 SORCS2Q96PQ0 1159 aa5.31□□□□□ -1.56
SHQ1-205ENST00000468371 UQCC2Q9BRT2 126 aa5.31□□□□□ -1.56
SHQ1-205ENST00000468371 CMC2Q9NRP2 79 aa5.31□□□□□ -1.56
SHQ1-205ENST00000468371 SIRT3Q9NTG7 399 aaPredicted RBP5.31□□□□□ -1.56
SHQ1-205ENST00000468371 FBXO34Q9NWN3 711 aa5.31□□□□□ -1.56
SHQ1-205ENST00000468371 IL20Q9NYY1 176 aa5.31□□□□□ -1.56
SHQ1-205ENST00000468371 KLHL13Q9P2N7 655 aa5.31□□□□□ -1.56
SHQ1-205ENST00000468371 CGGBP1Q9UFW8 167 aaPredicted RBP5.31□□□□□ -1.56
SHQ1-205ENST00000468371 DTX4Q9Y2E6 619 aa5.31□□□□□ -1.56
SHQ1-205ENST00000468371 MYO9AB2RTY4 2548 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 MCRIP1C9JLW8 97 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 TPPPO94811 219 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 VAMP5O95183 116 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 IGF2P01344 180 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 GLAP06280 429 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 HOXB5P09067 269 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 HOXB9P17482 250 aaPredicted RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 CLRN1P58418 232 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 MRPS10P82664 201 aaKnown RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 PDZK1IP1Q13113 114 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 CDK5R1Q15078 307 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 PEA15Q15121 130 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 Q499Y3 187 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 PAN3Q58A45 887 aaKnown RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 RNFT1Q5M7Z0 435 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 CLRN3Q8NCR9 226 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 OR2M3Q8NG83 312 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 OR52N5Q8NH56 324 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 MFSD8Q8NHS3 518 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 LHFPL5Q8TAF8 219 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF417Q8TAU3 575 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ZPLD1Q8TCW7 415 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 TMED6Q8WW62 240 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 MARC2Q969Z3 335 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 C20orf24Q9BUV8 137 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 GHITMQ9H3K2 345 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ELOVL3Q9HB03 270 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 C12orf10Q9HB07 376 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 CA10Q9NS85 328 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 KIF25Q9UIL4 384 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 IGSF10Q6WRI0 2623 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 USP9YO00507 2555 aaPredicted RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 A0A0A6YYH2 397 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 IGHV3-15A0A0B4J1V0 119 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 A6NJ64 397 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 OR6C65A6NJZ3 312 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF208O43345 1280 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 RAD51DO75771 328 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 SNAPC5O75971 98 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ITGA5P08648 1049 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 S100A2P29034 98 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ATP5J2P56134 94 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 PRPS1P60891 318 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 PSG6Q00889 435 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 LRRTM1Q86UE6 522 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 CDH26Q8IXH8 852 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 OR4C16Q8NGL9 310 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 HAVCR2Q8TDQ0 301 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 NPRL2Q8WTW4 380 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ADIPOR1Q96A54 375 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 FOXRED1Q96CU9 486 aaPredicted RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 SMIM19Q96E16 107 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 MS4A3Q96HJ5 214 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF681Q96N22 645 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 OPN3Q9H1Y3 402 aaPredicted RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF346Q9UL40 294 aaKnown RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 HDGFL3Q9Y3E1 203 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 SMAD7O15105 426 aaKnown RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 GPRIN2O60269 458 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 MTRF1O75570 445 aaKnown RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 HPNP05981 417 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 SULT1A3P0DMM9 295 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 SULT1A4P0DMN0 295 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 CAPZA1P52907 286 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 EIF5AP63241 154 aaKnown RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 DOC2BQ14184 412 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 SSX8Q7RTT4 187 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ITLN2Q8WWU7 325 aaPredicted RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 PELI1Q96FA3 418 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 CCL19Q99731 98 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 LMF2Q9BU23 707 aaKnown RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 EVA1AQ9H8M9 152 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ZDHHC11Q9H8X9 412 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 BCL2L10Q9HD36 194 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 ZNF701Q9NV72 531 aaPredicted RBP5.3□□□□□ -1.56
SHQ1-205ENST00000468371 TAS2R5Q9NYW4 299 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 CES1P1Q9UKY3 287 aa5.3□□□□□ -1.56
SHQ1-205ENST00000468371 USP9XQ93008 2570 aaPredicted RBP5.29□□□□□ -1.56
SHQ1-205ENST00000468371 TRAV20A0A0B4J274 112 aa5.29□□□□□ -1.56
SHQ1-205ENST00000468371 A0A0D9SG52 128 aa5.29□□□□□ -1.56
SHQ1-205ENST00000468371 PINLYPA6NC86 204 aa5.29□□□□□ -1.56
SHQ1-205ENST00000468371 OR5H14A6NHG9 310 aa5.29□□□□□ -1.56
SHQ1-205ENST00000468371 A8MVM7 634 aa5.29□□□□□ -1.56
SHQ1-205ENST00000468371 SLC33A1O00400 549 aaPredicted RBP5.29□□□□□ -1.56
SHQ1-205ENST00000468371 SLC16A7O60669 478 aa5.29□□□□□ -1.56
SHQ1-205ENST00000468371 SNAPINO95295 136 aa5.29□□□□□ -1.56
SHQ1-205ENST00000468371 TPT1P13693 172 aaKnown RBP5.29□□□□□ -1.56
SHQ1-205ENST00000468371 TIMP3P35625 211 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms