RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 RPS7P62081 194 aaKnown RBP9.35□□□□□ -0.91
COL4A6-205ENST00000468338 OR8B8Q15620 311 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 MPPED2Q15777 294 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 LCE2AQ5TA79 106 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-205ENST00000468338 LCN1P1Q5VSP4 162 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 FAM57BQ71RH2 274 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 THAP5Q7Z6K1 395 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 MOGAT3Q86VF5 341 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 SPICQ8N5J4 248 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 TCEANCQ8N8B7 351 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 SPERTQ8NA61 448 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 THEM6Q8WUY1 208 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 ITFG2Q969R8 447 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 REEP6Q96HR9 211 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 RBM4BQ9BQ04 359 aaKnown RBP9.35□□□□□ -0.91
COL4A6-205ENST00000468338 USE1Q9NZ43 259 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 COPS3Q9UNS2 423 aa9.35□□□□□ -0.91
COL4A6-205ENST00000468338 ACOD1A6NK06 481 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 SAC3D1A6NKF1 404 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 A8MXK9 166 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 M0R129 80 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 PEX14O75381 377 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 ZNF254O75437 659 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 CYB5R3P00387 301 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-205ENST00000468338 WNT2P09544 360 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 ZFP36P26651 326 aaKnown RBP9.34□□□□□ -0.91
COL4A6-205ENST00000468338 GSK3AP49840 483 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 MECP2P51608 486 aaKnown RBP9.34□□□□□ -0.91
COL4A6-205ENST00000468338 RPL11P62913 178 aaKnown RBP9.34□□□□□ -0.91
COL4A6-205ENST00000468338 OR8G1Q15617 311 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 TIGD6Q17RP2 521 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 KCTD18Q6PI47 426 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-205ENST00000468338 LRRN1Q6UXK5 716 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 IL17RELQ6ZVW7 336 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 BCDIN3DQ7Z5W3 292 aaKnown RBP9.34□□□□□ -0.91
COL4A6-205ENST00000468338 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-205ENST00000468338 C10orf67Q8IYJ2 551 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 ZNF679Q8IYX0 411 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 MUC20Q8N307 709 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-205ENST00000468338 KLHL36Q8N4N3 616 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 UBE2FQ969M7 185 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 OR8B4Q96RC9 309 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 IL4I1Q96RQ9 567 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 MNTQ99583 582 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 OR10A2Q9H208 303 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 LPAR2Q9HBW0 351 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 ADGRL4Q9HBW9 690 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 FAM206AQ9NX38 181 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 DNAJC27Q9NZQ0 273 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 ZNF391Q9UJN7 358 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 LAMP5Q9UJQ1 280 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 LRP12Q9Y561 859 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 TMEM14AQ9Y6G1 99 aa9.34□□□□□ -0.91
COL4A6-205ENST00000468338 FBN1P35555 2871 aaKnown RBP9.34□□□□□ -0.92
COL4A6-205ENST00000468338 ISPDA4D126 451 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 LRRC30A6NM36 301 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 CEACAM18A8MTB9 384 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 H3BS24 57 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 J3QLI3 93 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 WIPF1O43516 503 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 FAM20BO75063 409 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 SRSF10O75494 262 aaKnown RBP9.33□□□□□ -0.92
COL4A6-205ENST00000468338 FOXH1O75593 365 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 PNPP00491 289 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 IGLV3-1P01715 115 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 GATA3P23771 443 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 ZNF404Q494X3 552 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 PRAMEF6Q5VXH4 476 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 GID4Q8IVV7 300 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 C11orf53Q8IXP5 236 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 C1orf87Q8N0U7 546 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 CSNK2A3Q8NEV1 391 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 OR8B12Q8NGG6 310 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 OR8J1Q8NGP2 316 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 TRUB1Q8WWH5 349 aaKnown RBP9.33□□□□□ -0.92
COL4A6-205ENST00000468338 ASB17Q8WXJ9 295 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 DACT3Q96B18 629 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-205ENST00000468338 PGAM5Q96HS1 289 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 HRASLS5Q96KN8 279 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 LYZL4Q96KX0 146 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 CNN2Q99439 309 aaKnown RBP9.33□□□□□ -0.92
COL4A6-205ENST00000468338 ADAT1Q9BUB4 502 aaKnown RBP9.33□□□□□ -0.92
COL4A6-205ENST00000468338 SSBP4Q9BWG4 385 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-205ENST00000468338 MROQ9BYG7 248 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 UBAP1Q9NZ09 502 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 H2AFY2Q9P0M6 372 aaPredicted RBP9.33□□□□□ -0.92
COL4A6-205ENST00000468338 N6AMT1Q9Y5N5 214 aa9.33□□□□□ -0.92
COL4A6-205ENST00000468338 DNHD1Q96M86 4753 aa9.32□□□□□ -0.92
COL4A6-205ENST00000468338 A0A0G2JMP0 313 aa9.32□□□□□ -0.92
COL4A6-205ENST00000468338 IGHV3-64DA0A0J9YX35 117 aa9.32□□□□□ -0.92
COL4A6-205ENST00000468338 A0A0U1RQV5 110 aa9.32□□□□□ -0.92
COL4A6-205ENST00000468338 A0A0X1KG70 313 aa9.32□□□□□ -0.92
COL4A6-205ENST00000468338 ANKRD30BLA7E2S9 258 aa9.32□□□□□ -0.92
COL4A6-205ENST00000468338 TNFRSF13BO14836 293 aaPredicted RBP9.32□□□□□ -0.92
COL4A6-205ENST00000468338 CST4P01036 141 aa9.32□□□□□ -0.92
COL4A6-205ENST00000468338 LHBP01229 141 aa9.32□□□□□ -0.92
COL4A6-205ENST00000468338 MRPL3P09001 348 aaKnown RBP9.32□□□□□ -0.92
COL4A6-205ENST00000468338 ACKR3P25106 362 aa9.32□□□□□ -0.92
COL4A6-205ENST00000468338 HTR1FP30939 366 aa9.32□□□□□ -0.92
COL4A6-205ENST00000468338 CFHR2P36980 270 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms