RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ZBTB25P24278 435 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 ACSM6Q6P461 480 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 C11orf42Q8N5U0 333 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 FOXB1Q99853 325 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 TEX101Q9BY14 249 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 FSCN3Q9NQT6 498 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 NSG2Q9Y328 171 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 LILRA5A6NI73 299 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 DHHO43323 396 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 SPRY1O43609 319 aaPredicted RBP7.85□□□□□ -1.15
HPS4-209ENST00000466781 TXNDC12O95881 172 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 THBS4P35443 961 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 ENDOGQ14249 297 aaKnown RBP7.85□□□□□ -1.15
HPS4-209ENST00000466781 DHRS13Q6UX07 377 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 ABI3BPQ7Z7G0 1075 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 Q8IYB0 196 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 NUDT8Q8WV74 236 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 TTC9Q92623 222 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 GPR78Q96P69 363 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 ATP5SQ99766 215 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 CXorf51AA0A1B0GTR3 108 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 SLC25A4P12235 298 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 ETV1P50549 477 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 METAP1P53582 386 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 CEACAM16Q2WEN9 425 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 RHOUQ7L0Q8 258 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 RPUSD4Q96CM3 377 aaKnown RBP7.85□□□□□ -1.15
HPS4-209ENST00000466781 SPACA5Q96QH8 159 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 ARHGDIGQ99819 225 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 POMT2Q9UKY4 750 aa7.85□□□□□ -1.15
HPS4-209ENST00000466781 A0A0B4J203 849 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 ZNF727A8MUV8 499 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 SLC2A10O95528 541 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 OPRK1P41145 380 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 FAM53BQ14153 422 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 CD276Q5ZPR3 534 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 TMEM108Q6UXF1 575 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 OR6S1Q8NH40 331 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 BCL2L2Q92843 193 aaPredicted RBP7.84□□□□□ -1.15
HPS4-209ENST00000466781 PLSCR3Q9NRY6 295 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 RCL1Q9Y2P8 373 aaKnown RBP7.84□□□□□ -1.15
HPS4-209ENST00000466781 CHST2Q9Y4C5 530 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 SPTY2D1-AS1A0A0U1RR47 76 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 PIGAP37287 484 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 KIR2DS2P43631 304 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 HOXA4Q00056 320 aaPredicted RBP7.84□□□□□ -1.15
HPS4-209ENST00000466781 AQP6Q13520 282 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 TCTN1Q2MV58 587 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 WIPI1Q5MNZ9 446 aaPredicted RBP7.84□□□□□ -1.15
HPS4-209ENST00000466781 ADAM5Q6NVV9 412 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 H3F3CQ6NXT2 135 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 NPEPL1Q8NDH3 523 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 NT5CQ8TCD5 201 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 ISL2Q96A47 359 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 CLDN23Q96B33 292 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 UMAD1C9J7I0 102 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 M0R1X1 148 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 GPR31O00270 319 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 TNFSF14O43557 240 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 ZNF17P17021 662 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 BMP5P22003 454 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 PIGPP57054 158 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 C19orf35Q6ZS72 473 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 LHX4Q969G2 390 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 NAA50Q9GZZ1 169 aaKnown RBP7.84□□□□□ -1.15
HPS4-209ENST00000466781 RAB18Q9NP72 206 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 UBE2L5PA0A1B0GUS4 154 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 TMEM129A0AVI4 362 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 CLEC18AA5D8T8 446 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 CDC14BO60729 498 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 ANKRD34CP0C6C1 535 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 SCGB1C2P0DMR2 95 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 SRSF5Q13243 272 aaKnown RBP7.84□□□□□ -1.15
HPS4-209ENST00000466781 KIAA0141Q14154 515 aaPredicted RBP7.84□□□□□ -1.15
HPS4-209ENST00000466781 SLC17A1Q14916 467 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 ANKRD34AQ69YU3 496 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 TMEM92Q6UXU6 159 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 CYHR1Q6ZMK1 362 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 CLEC18CQ8NCF0 446 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 OR52I2Q8NH67 350 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 OR1F12Q8NHA8 337 aa7.84□□□□□ -1.15
HPS4-209ENST00000466781 RBM14Q96PK6 669 aaKnown RBP7.84□□□□□ -1.15
HPS4-209ENST00000466781 ALKBH3Q96Q83 286 aaPredicted RBP7.84□□□□□ -1.15
HPS4-209ENST00000466781 PRKNO60260 465 aaPredicted RBP7.84□□□□□ -1.16
HPS4-209ENST00000466781 SEMG1P04279 462 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 GPX2P18283 190 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 COX7A1P24310 79 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 CDAP32320 146 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 CEACAM3P40198 252 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 ASCL1P50553 236 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 TNFAIP6P98066 277 aaPredicted RBP7.84□□□□□ -1.16
HPS4-209ENST00000466781 IGFBP7Q16270 282 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 FA2HQ7L5A8 372 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 FAM122BQ7Z309 247 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 PRR7Q8TB68 274 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 SRRQ9GZT4 340 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 GABARAPL1Q9H0R8 117 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 SMOC1Q9H4F8 434 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 ZNF586Q9NXT0 402 aa7.84□□□□□ -1.16
HPS4-209ENST00000466781 RNASEK-C17orf49H0YIS7 233 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms