RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 GPR50Q13585 617 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 DOC2BQ14184 412 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 MED22Q15528 200 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 ZNF367Q7RTV3 350 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 SPARTQ8N0X7 666 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 SPERTQ8NA61 448 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 GTF3AQ92664 365 aaKnown RBP13.61□□□□□ -0.23
GPC1-207ENST00000466624 NR1H4Q96RI1 486 aaPredicted RBP13.61□□□□□ -0.23
GPC1-207ENST00000466624 PDCD1LG2Q9BQ51 273 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 ZNF696Q9H7X3 374 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 ACOT13Q9NPJ3 140 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 IL19Q9UHD0 177 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 ENPP5Q9UJA9 477 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 PIGLQ9Y2B2 252 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 SIRT4Q9Y6E7 314 aaPredicted RBP13.61□□□□□ -0.23
GPC1-207ENST00000466624 MLNRO43193 412 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 SPRY3O43610 288 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 F12P00748 615 aaPredicted RBP13.6□□□□□ -0.23
GPC1-207ENST00000466624 PCMT1P22061 227 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 MAP2K4P45985 399 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 MLLT11Q13015 90 aaPredicted RBP13.6□□□□□ -0.23
GPC1-207ENST00000466624 TMEM42Q69YG0 159 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 RDH10Q8IZV5 341 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 ZCCHC24Q8N2G6 241 aaKnown RBP13.6□□□□□ -0.23
GPC1-207ENST00000466624 CELF2-AS1Q8N7Q2 184 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 OR2Z1Q8NG97 314 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 FCGR1BQ92637 280 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 ELMOD3Q96FG2 381 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 PGLYRP3Q96LB9 341 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 ADAT1Q9BUB4 502 aaKnown RBP13.6□□□□□ -0.23
GPC1-207ENST00000466624 TPK1Q9H3S4 243 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 PLEKHA1Q9HB21 404 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 MYOZ1Q9NP98 299 aaPredicted RBP13.6□□□□□ -0.23
GPC1-207ENST00000466624 ZNF281Q9Y2X9 895 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 RHBDD3Q9Y3P4 386 aa13.6□□□□□ -0.23
GPC1-207ENST00000466624 SETXQ7Z333 2677 aaKnown RBP13.6□□□□□ -0.23
GPC1-207ENST00000466624 CSMD2Q7Z408 3487 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.59□□□□□ -0.23
GPC1-207ENST00000466624 IGHV4-39P01824 125 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 FAHP16930 419 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 CELP19835 753 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 CA6P23280 308 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 GNALP38405 381 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 CD200P41217 278 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 MAGEB1P43366 347 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 CDH15P55291 814 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 ATP5J2P56134 94 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 MRPS11P82912 194 aaKnown RBP13.59□□□□□ -0.23
GPC1-207ENST00000466624 MZT1Q08AG7 82 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 TESK1Q15569 626 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 OR8G1Q15617 311 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 YIF1BQ5BJH7 314 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 UBE2UQ5VVX9 321 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 GPR148Q8TDV2 347 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 FOXC2Q99958 501 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 PAPOLGQ9BWT3 736 aaKnown RBP13.59□□□□□ -0.23
GPC1-207ENST00000466624 EGLN1Q9GZT9 426 aa13.59□□□□□ -0.23
GPC1-207ENST00000466624 A0A087WXM4 84 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 H0YL77 283 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 NCR1O76036 304 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 PTBP3O95758 552 aaKnown RBP13.58□□□□□ -0.24
GPC1-207ENST00000466624 HLA-DPB1P04440 258 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 TNFRSF1AP19438 455 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 SRP9P49458 86 aaKnown RBP13.58□□□□□ -0.24
GPC1-207ENST00000466624 CCL8P80075 99 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 TNFAIP6P98066 277 aaPredicted RBP13.58□□□□□ -0.24
GPC1-207ENST00000466624 SLC3A1Q07837 685 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 PRDX4Q13162 271 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 TPBGQ13641 420 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 CLVS2Q5SYC1 327 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 ZFP41Q8N8Y5 198 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 OR10AD1Q8NGE0 317 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 OR51A4Q8NGJ6 313 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 OR10AC1Q8NH08 325 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 UBASH3BQ8TF42 649 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 PP6455Q8WZ26 134 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 RGP1Q92546 391 aaPredicted RBP13.58□□□□□ -0.24
GPC1-207ENST00000466624 THRSPQ92748 146 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 GHSRQ92847 366 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 UFD1Q92890 307 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 ITPKCQ96DU7 683 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 PERPQ96FX8 193 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 TECTBQ96PL2 329 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 MGLLQ99685 303 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 CXXC4Q9H2H0 198 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 SAP30LQ9HAJ7 183 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 ZNF275Q9NSD4 429 aaPredicted RBP13.58□□□□□ -0.24
GPC1-207ENST00000466624 DECR2Q9NUI1 292 aa13.58□□□□□ -0.24
GPC1-207ENST00000466624 TRBV5-5A0A0J9YX44 114 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 ANXA2P2A6NMY6 339 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 ZNF850A8MQ14 1090 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 NDUFS7O75251 213 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 HPXP02790 462 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 CPEP16870 476 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 GATA4P43694 442 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 TSTQ16762 297 aaKnown RBP13.57□□□□□ -0.24
GPC1-207ENST00000466624 PRSS57Q6UWY2 283 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 ZDHHC23Q8IYP9 409 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 MS4A15Q8N5U1 240 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 PARP16Q8N5Y8 322 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms