RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 LHX4Q969G2 390 aa16.36■□□□□ 0.21
VARS-221ENST00000463184 UBE2FQ969M7 185 aa16.36■□□□□ 0.21
VARS-221ENST00000463184 SPTSSAQ969W0 71 aa16.36■□□□□ 0.21
VARS-221ENST00000463184 ZNF799Q96GE5 643 aa16.36■□□□□ 0.21
VARS-221ENST00000463184 KRT84Q9NSB2 600 aa16.36■□□□□ 0.21
VARS-221ENST00000463184 MRPL15Q9P015 296 aaKnown RBP16.36■□□□□ 0.21
VARS-221ENST00000463184 KCNG2Q9UJ96 466 aa16.36■□□□□ 0.21
VARS-221ENST00000463184 GGT3PA6NGU5 568 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 GPR137BO60478 399 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 BAG2O95816 211 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 POU1F1P28069 291 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 ARF6P62330 175 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 MZT1Q08AG7 82 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 SLC35F1Q5T1Q4 408 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 LDLRAD3Q86YD5 345 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 SCCPDHQ8NBX0 429 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 OR4Q3Q8NH05 313 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 RASSF4Q9H2L5 321 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 SMURF1Q9HCE7 757 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 ENOPH1Q9UHY7 261 aa16.35■□□□□ 0.21
VARS-221ENST00000463184 PRKDCP78527 4128 aaKnown RBP16.35■□□□□ 0.21
VARS-221ENST00000463184 OR6C68A6NDL8 312 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 IGHV4-59P01825 116 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 GYPAP02724 150 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 ZNF823P16415 610 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 GRK5P34947 590 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 CRISP1P54107 249 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 PROK1P58294 105 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 ESRRGP62508 458 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 ZNF92Q03936 586 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.34■□□□□ 0.21
VARS-221ENST00000463184 GINS1Q14691 196 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 SNAI3Q3KNW1 292 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 GDPGP1Q6ZNW5 385 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 BTN2A1Q7KYR7 527 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 MAP6Q96JE9 813 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 DPAGT1Q9H3H5 408 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 CNTD2Q9H8S5 307 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 MRPL22Q9NWU5 206 aaKnown RBP16.34■□□□□ 0.21
VARS-221ENST00000463184 C1orf123Q9NWV4 160 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 KAAG1Q9UBP8 84 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 NOTCH1P46531 2555 aa16.34■□□□□ 0.21
VARS-221ENST00000463184 A0A0U1RQK1 487 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 DVL1O14640 695 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 MITFO75030 526 aaPredicted RBP16.33■□□□□ 0.2
VARS-221ENST00000463184 LHBP01229 141 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 IFNGP01579 166 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 ELF3P78545 371 aaPredicted RBP16.33■□□□□ 0.2
VARS-221ENST00000463184 CDK5Q00535 292 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 DBPQ10586 325 aaPredicted RBP16.33■□□□□ 0.2
VARS-221ENST00000463184 IQCF1Q8N6M8 205 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 ZSCAN4Q8NAM6 433 aaPredicted RBP16.33■□□□□ 0.2
VARS-221ENST00000463184 SDR9C7Q8NEX9 313 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 CIB1Q99828 191 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 C9orf16Q9BUW7 83 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 TEX12Q9BXU0 123 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 SLC25A19Q9HC21 320 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 TCF7L1Q9HCS4 588 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 KPTNQ9Y664 436 aa16.33■□□□□ 0.2
VARS-221ENST00000463184 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.32■□□□□ 0.2
VARS-221ENST00000463184 SLC22A31A6NKX4 558 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 A6NLC8 198 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 HMGN1P05114 100 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 GRPP07492 148 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 OTX1P32242 354 aaPredicted RBP16.32■□□□□ 0.2
VARS-221ENST00000463184 RCN1Q15293 331 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 TEX36Q5VZQ5 186 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 DRAM2Q6UX65 266 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 FAM90A1Q86YD7 464 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 GCSAMQ8N6F7 178 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 OR2AE1Q8NHA4 323 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 DDOQ99489 341 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 FN3KQ9H479 309 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 CMC2Q9NRP2 79 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 C14orf119Q9NWQ9 140 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 USE1Q9NZ43 259 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 FAM96BQ9Y3D0 163 aa16.32■□□□□ 0.2
VARS-221ENST00000463184 A0A1B0GVI7 797 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 hCG_1807616A0A1W2PRN6 198 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 RIIAD1A6NNX1 92 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 FCN3O75636 299 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 ALDH3A2P51648 485 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 CDONQ4KMG0 1287 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 GLYATL3Q5SZD4 288 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 ZNF826PQ6ZT77 177 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 CBR4Q8N4T8 237 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 SLC37A3Q8NCC5 494 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 NPRL2Q8WTW4 380 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 DMRTB1Q96MA1 342 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 C16orf95Q9H693 158 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 OPA3Q9H6K4 179 aa16.31■□□□□ 0.2
VARS-221ENST00000463184 RPUSD1Q9UJJ7 312 aaKnown RBP16.31■□□□□ 0.2
VARS-221ENST00000463184 CAB39Q9Y376 341 aaPredicted RBP16.31■□□□□ 0.2
VARS-221ENST00000463184 EI24O14681 340 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 ALPLP05186 524 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 ZNF3P17036 446 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 PTGES3Q15185 160 aaKnown RBP16.3■□□□□ 0.2
VARS-221ENST00000463184 ZBTB49Q6ZSB9 765 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 Q6ZSV7 163 aa16.3■□□□□ 0.2
VARS-221ENST00000463184 VMO1Q7Z5L0 202 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms