RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 LIPFP07098 398 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 RPSAP08865 295 aaKnown RBP7.53□□□□□ -1.2
DDX39B-216ENST00000462421 PRSS12P56730 875 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 CXCR4P61073 352 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 FAM3AP98173 230 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 EGR3Q06889 387 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 PRDX4Q13162 271 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 MED21Q13503 144 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 BLMHQ13867 455 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 KPNB1Q14974 876 aaKnown RBP7.53□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF404Q494X3 552 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 LRRC10Q5BKY1 277 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF362Q5T0B9 420 aaPredicted RBP7.53□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF684Q5T5D7 378 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 LINC01590Q5TEZ4 76 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 METTL11BQ5VVY1 283 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 MEDAGQ5VYS4 303 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 SLX4IPQ5VYV7 408 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 PLCXD3Q63HM9 321 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 KDM4DQ6B0I6 523 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF322Q6U7Q0 402 aaPredicted RBP7.53□□□□□ -1.2
DDX39B-216ENST00000462421 FIP1L1Q6UN15 594 aaKnown RBP7.53□□□□□ -1.2
DDX39B-216ENST00000462421 PLEKHG7Q6ZR37 379 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 CCDC54Q8NEL0 328 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 BBS1Q8NFJ9 593 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 OR10S1Q8NGN2 331 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 SPATA3Q8NHX4 192 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 ZNF671Q8TAW3 534 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 LRRC29Q8WV35 223 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 TRUB1Q8WWH5 349 aaKnown RBP7.53□□□□□ -1.2
DDX39B-216ENST00000462421 SPSB4Q96A44 273 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 DUS3LQ96G46 650 aaKnown RBP7.53□□□□□ -1.2
DDX39B-216ENST00000462421 RNF170Q96K19 258 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 RNPEPL1Q9HAU8 725 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 CLN6Q9NWW5 311 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 GMPPBQ9Y5P6 360 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 SNX5Q9Y5X3 404 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 ALPK2Q86TB3 2170 aa7.53□□□□□ -1.2
DDX39B-216ENST00000462421 NF1P21359 2839 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ARFGEF3Q5TH69 2177 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 hCG_38984A0A1B0GV85 526 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 A0A1W2PPH5 198 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 OR5B21A6NL26 309 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ZAR1LA6NP61 321 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ZNF850A8MQ14 1090 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 PSMD9O00233 223 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 TMPRSS2O15393 492 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 PRKYO43930 277 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 MITFO75030 526 aaPredicted RBP7.52□□□□□ -1.21
DDX39B-216ENST00000462421 GATBO75879 557 aaKnown RBP7.52□□□□□ -1.21
DDX39B-216ENST00000462421 RPP14O95059 124 aaKnown RBP7.52□□□□□ -1.21
DDX39B-216ENST00000462421 OR2T7P0C7T2 308 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 MUC1P15941 1255 aaPredicted RBP7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ALOX5APP20292 161 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 HTR1FP30939 366 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 DCTDP32321 178 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 CD80P33681 288 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ALDH3A2P51648 485 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 CAPZA1P52907 286 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ACTA2P62736 377 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 GNG3P63215 75 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ACTG2P63267 376 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 DBPQ10586 325 aaPredicted RBP7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ZNF154Q13106 437 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ZBTB37Q5TC79 503 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 GPR157Q5UAW9 335 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 C12orf73Q69YU5 71 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 SFRP4Q6FHJ7 346 aaPredicted RBP7.52□□□□□ -1.21
DDX39B-216ENST00000462421 C12orf54Q6X4T0 127 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 MOB3CQ70IA8 216 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 OR2T27Q8NH04 317 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ZNRF4Q8WWF5 429 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ST8SIA4Q92187 359 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 DVL3Q92997 716 aaPredicted RBP7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ZDHHC16Q969W1 377 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 SGK3Q96BR1 496 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 MED30Q96HR3 178 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 OR8B4Q96RC9 309 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 TBX5Q99593 518 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 APOL4Q9BPW4 351 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 NUDT16L1Q9BRJ7 211 aaKnown RBP7.52□□□□□ -1.21
DDX39B-216ENST00000462421 TMEM246Q9BRR3 403 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 GABARAPL3Q9BY60 117 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 TTTY10Q9BZA0 68 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 PBOV1Q9GZY1 135 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 ZMAT3Q9HA38 289 aaKnown RBP7.52□□□□□ -1.21
DDX39B-216ENST00000462421 NUP50Q9UKX7 468 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 PIGLQ9Y2B2 252 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 POLDIP2Q9Y2S7 368 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 CAB39Q9Y376 341 aaPredicted RBP7.52□□□□□ -1.21
DDX39B-216ENST00000462421 CSPG4Q6UVK1 2322 aa7.52□□□□□ -1.21
DDX39B-216ENST00000462421 NIPBLQ6KC79 2804 aaeCLIP7.51□□□□□ -1.21
DDX39B-216ENST00000462421 A0A0U1RQV5 110 aa7.51□□□□□ -1.21
DDX39B-216ENST00000462421 A0A1W2PQ09 198 aa7.51□□□□□ -1.21
DDX39B-216ENST00000462421 DAPL1A0PJW8 107 aa7.51□□□□□ -1.21
DDX39B-216ENST00000462421 A8MXK9 166 aa7.51□□□□□ -1.21
DDX39B-216ENST00000462421 EI24O14681 340 aa7.51□□□□□ -1.21
DDX39B-216ENST00000462421 GPR37O15354 613 aa7.51□□□□□ -1.21
DDX39B-216ENST00000462421 SYT7O43581 403 aa7.51□□□□□ -1.21
DDX39B-216ENST00000462421 DHRS3O75911 302 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms