RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PRR32B1ATL7 298 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 BAG2O95816 211 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 ADRA2CP18825 462 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 EPHA1P21709 976 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 ZFP36P26651 326 aaKnown RBP12.89□□□□□ -0.35
VARS-219ENST00000461328 HTR1FP30939 366 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 CD80P33681 288 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 SEC61A1P61619 476 aaKnown RBP12.89□□□□□ -0.35
VARS-219ENST00000461328 EFNB1P98172 346 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 IL5RAQ01344 420 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 ROM1Q03395 351 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 PQLC1Q8N2U9 271 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 PLPP7Q8NBV4 271 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 DEFB108BQ8NET1 73 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 OR10H4Q8NGA5 316 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 OR8B3Q8NGG8 313 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 NANPQ8TBE9 248 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 ZNF418Q8TF45 676 aaPredicted RBP12.89□□□□□ -0.35
VARS-219ENST00000461328 FAM71F1Q96KD3 344 aaPredicted RBP12.89□□□□□ -0.35
VARS-219ENST00000461328 LYZL4Q96KX0 146 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 OR8B2Q96RD0 313 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 APOL4Q9BPW4 351 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 MICU1Q9BPX6 476 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 TMEM246Q9BRR3 403 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 PBOV1Q9GZY1 135 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 ABCB9Q9NP78 766 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 HAO2Q9NYQ3 351 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.89□□□□□ -0.35
VARS-219ENST00000461328 MIOXQ9UGB7 285 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 LRCH1Q9Y2L9 728 aa12.89□□□□□ -0.35
VARS-219ENST00000461328 A0A0A6YYJ9 748 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 PPIAL4CA0A0B4J2A2 164 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 ACOD1A6NK06 481 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 F5H0A9 414 aaPredicted RBP12.88□□□□□ -0.35
VARS-219ENST00000461328 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 LOC110117498-PIK3R3F6TDL0 507 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 RGS9O75916 674 aaPredicted RBP12.88□□□□□ -0.35
VARS-219ENST00000461328 KRT8P05787 483 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 ACKR3P25106 362 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 GNB2P62879 340 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 MFGE8Q08431 387 aaPredicted RBP12.88□□□□□ -0.35
VARS-219ENST00000461328 PRDX4Q13162 271 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 KCNJ8Q15842 424 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 ZNF404Q494X3 552 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 BCL2L15Q5TBC7 163 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 ZNF826PQ6ZT77 177 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 KCTD8Q6ZWB6 473 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 THAP5Q7Z6K1 395 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 PIGCQ92535 297 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 EME1Q96AY2 570 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 NEIL1Q96FI4 390 aaPredicted RBP12.88□□□□□ -0.35
VARS-219ENST00000461328 RTL8AQ9BWD3 113 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 SSBP3Q9BWW4 388 aaPredicted RBP12.88□□□□□ -0.35
VARS-219ENST00000461328 MOB1AQ9H8S9 216 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 TMEM165Q9HC07 324 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 MMP26Q9NRE1 261 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 SVEP1Q4LDE5 3571 aa12.88□□□□□ -0.35
VARS-219ENST00000461328 A0A0U1RQV5 110 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 ZNF850A8MQ14 1090 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 LGALS8O00214 317 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 MAGEB4O15481 346 aaPredicted RBP12.87□□□□□ -0.35
VARS-219ENST00000461328 RPP14O95059 124 aaKnown RBP12.87□□□□□ -0.35
VARS-219ENST00000461328 PTBP3O95758 552 aaKnown RBP12.87□□□□□ -0.35
VARS-219ENST00000461328 DCTDP32321 178 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 MAP2K3P46734 347 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 PITPNBP48739 271 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 HOXA4Q00056 320 aaPredicted RBP12.87□□□□□ -0.35
VARS-219ENST00000461328 EGR3Q06889 387 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 SFRP4Q6FHJ7 346 aaPredicted RBP12.87□□□□□ -0.35
VARS-219ENST00000461328 PLEKHG7Q6ZR37 379 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 DCDC5Q6ZRR9 648 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 ZBTB49Q6ZSB9 765 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 ZDHHC23Q8IYP9 409 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 YIPF7Q8N8F6 280 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 OR1M1Q8NGA1 313 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 OR51E1Q8TCB6 317 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 HIST1H2AAQ96QV6 131 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 PPP1R3EQ9H7J1 279 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 TRIM36Q9NQ86 728 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 GPR84Q9NQS5 396 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 NUFIP1Q9UHK0 495 aaKnown RBP12.87□□□□□ -0.35
VARS-219ENST00000461328 OPN4Q9UHM6 478 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 GMPPBQ9Y5P6 360 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 MPC1Q9Y5U8 109 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 R4GMQ9 66 aa12.87□□□□□ -0.35
VARS-219ENST00000461328 TRAV38-1A0A0B4J264 116 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 ZNF816-ZNF321PA0A0X1KG74 233 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 OOEPA6NGQ2 149 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 A8MXK9 166 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 VENTXO95231 258 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 CST4P01036 141 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 WNT2P09544 360 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 OR2T7P0C7T2 308 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 CPT2P23786 658 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 CSNK2BP67870 215 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 ZNF154Q13106 437 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 TMED1Q13445 227 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 SSX6Q7RTT6 188 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 FAM220AQ7Z4H9 259 aa12.86□□□□□ -0.35
VARS-219ENST00000461328 SEMA6DQ8NFY4 1073 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms