RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ZNF816-ZNF321PA0A0X1KG74 233 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 A6NLC8 198 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 PRR32B1ATL7 298 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 FAM157AC9JC47 383 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 ANKRD65E5RJM6 399 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 FOXH1O75593 365 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 FADS2O95864 444 aaKnown RBP13.59□□□□□ -0.23
CD28-203ENST00000458610 CYB5R3P00387 301 aaPredicted RBP13.59□□□□□ -0.23
CD28-203ENST00000458610 IFNA2P01563 188 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 ZMYND11Q15326 602 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 KLHL22Q53GT1 634 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 PRAMEF6Q5VXH4 476 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 DHRSXQ8N5I4 330 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 ACBD7Q8N6N7 88 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 SETD9Q8NE22 299 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 OR51E1Q8TCB6 317 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 PIGCQ92535 297 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 LYZL4Q96KX0 146 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 ADI1Q9BV57 179 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 RNPEPL1Q9HAU8 725 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 PATZ1Q9HBE1 687 aaKnown RBP13.59□□□□□ -0.23
CD28-203ENST00000458610 GPR84Q9NQS5 396 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 MIOXQ9UGB7 285 aa13.59□□□□□ -0.23
CD28-203ENST00000458610 EXOGQ9Y2C4 368 aaKnown RBP13.59□□□□□ -0.23
CD28-203ENST00000458610 TMEM210A6NLX4 147 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 ZNF850A8MQ14 1090 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 FAM20BO75063 409 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 SRSF10O75494 262 aaKnown RBP13.58□□□□□ -0.24
CD28-203ENST00000458610 DHRS3O75911 302 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 RPP14O95059 124 aaKnown RBP13.58□□□□□ -0.24
CD28-203ENST00000458610 APOL3O95236 402 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 TTRP02766 147 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 GABRB1P18505 474 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 PMELP40967 661 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 ACTA2P62736 377 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 ACTG2P63267 376 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 RAB40BQ12829 278 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 PRDX4Q13162 271 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 MPPED2Q15777 294 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 ZNF684Q5T5D7 378 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 LIPNQ5VXI9 398 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 LPCAT4Q643R3 524 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 NLRC3Q7RTR2 1065 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 KRT74Q7RTS7 529 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 ZDHHC23Q8IYP9 409 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 RFLNBQ8N5W9 214 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 FAM71F1Q96KD3 344 aaPredicted RBP13.58□□□□□ -0.24
CD28-203ENST00000458610 TMEM165Q9HC07 324 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 G6PC2Q9NQR9 355 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 INPP5EQ9NRR6 644 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 HIF1ANQ9NWT6 349 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 C1orf123Q9NWV4 160 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 DCAF16Q9NXF7 216 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 ENPP5Q9UJA9 477 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 TLN2Q9Y4G6 2542 aa13.58□□□□□ -0.24
CD28-203ENST00000458610 DYSFO75923 2080 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 hCG_1807616A0A1W2PRN6 198 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 IRGMA1A4Y4 181 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 CASQ2O14958 399 aaPredicted RBP13.57□□□□□ -0.24
CD28-203ENST00000458610 MAGEB4O15481 346 aaPredicted RBP13.57□□□□□ -0.24
CD28-203ENST00000458610 NDUFA2O43678 99 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 PLPP2O43688 288 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 PNPP00491 289 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 IGLV3-1P01715 115 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 RPSAP08865 295 aaKnown RBP13.57□□□□□ -0.24
CD28-203ENST00000458610 DBTP11182 482 aaKnown RBP13.57□□□□□ -0.24
CD28-203ENST00000458610 ZNF12P17014 697 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 GATA3P23771 443 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 ZNF85Q03923 595 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 MFGE8Q08431 387 aaPredicted RBP13.57□□□□□ -0.24
CD28-203ENST00000458610 IL18R1Q13478 541 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 CR1LQ2VPA4 569 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 ESCO2Q56NI9 601 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 FAM120AOSQ5T036 256 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 DOK3Q7L591 496 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 SSX6Q7RTT6 188 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 OR1M1Q8NGA1 313 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 CYGBQ8WWM9 190 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 OR5P3Q8WZ94 311 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 RNF170Q96K19 258 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 LPAR2Q9HBW0 351 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 GNG8Q9UK08 70 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 HSPE1-MOB4S4R3N1 261 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 C2CD3Q4AC94 2353 aa13.57□□□□□ -0.24
CD28-203ENST00000458610 YLPM1P49750 1951 aaKnown RBP13.56□□□□□ -0.24
CD28-203ENST00000458610 TRAV38-1A0A0B4J264 116 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 A0A0G2JMP0 313 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 A0A0X1KG70 313 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 A0A1B0GVI7 797 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 ERICH4A6NGS2 130 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 DHRS7CA6NNS2 312 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 J3QLI3 93 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 J3QRE1 110 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 LGALS8O00214 317 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 WNT2P09544 360 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 FAM157CP0CG43 387 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 ACKR3P25106 362 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 PEX2P28328 305 aa13.56□□□□□ -0.24
CD28-203ENST00000458610 ELF3P78545 371 aaPredicted RBP13.56□□□□□ -0.24
CD28-203ENST00000458610 ZNF91Q05481 1191 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms