RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 LRTOMTQ8WZ04 291 aa17.69■□□□□ 0.42
HMGB3-205ENST00000455596 DACT3Q96B18 629 aaPredicted RBP17.69■□□□□ 0.42
HMGB3-205ENST00000455596 NUDT16L1Q9BRJ7 211 aaKnown RBP17.69■□□□□ 0.42
HMGB3-205ENST00000455596 MROQ9BYG7 248 aa17.69■□□□□ 0.42
HMGB3-205ENST00000455596 RNPEPL1Q9HAU8 725 aa17.69■□□□□ 0.42
HMGB3-205ENST00000455596 H2AFY2Q9P0M6 372 aaPredicted RBP17.69■□□□□ 0.42
HMGB3-205ENST00000455596 ERVK-18Q9QC07 812 aa17.69■□□□□ 0.42
HMGB3-205ENST00000455596 ENOPH1Q9UHY7 261 aa17.69■□□□□ 0.42
HMGB3-205ENST00000455596 RHBDD3Q9Y3P4 386 aa17.69■□□□□ 0.42
HMGB3-205ENST00000455596 TMEM14AQ9Y6G1 99 aa17.69■□□□□ 0.42
HMGB3-205ENST00000455596 KIR2DS1A0A191URI9 304 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 ZAR1LA6NP61 321 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 LHBP01229 141 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 IL5RAQ01344 420 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 SLX4IPQ5VYV7 408 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 C12orf73Q69YU5 71 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 LYZL4Q96KX0 146 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 TECTBQ96PL2 329 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 MICU1Q9BPX6 476 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 PPP1R3EQ9H7J1 279 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 ABCB9Q9NP78 766 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 CTSZQ9UBR2 303 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 MPC1Q9Y5U8 109 aa17.68■□□□□ 0.42
HMGB3-205ENST00000455596 ACOD1A6NK06 481 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 PSMD9O00233 223 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 ADAM20O43506 726 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 NXNL2Q5VZ03 156 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 RBMS3Q6XE24 437 aaKnown RBP17.67■□□□□ 0.42
HMGB3-205ENST00000455596 MEPCEQ7L2J0 689 aaKnown RBP17.67■□□□□ 0.42
HMGB3-205ENST00000455596 C11orf53Q8IXP5 236 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 TCEANCQ8N8B7 351 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 FAM216AQ8WUB2 273 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 LRRC29Q8WV35 223 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 ASB17Q8WXJ9 295 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 ITPKCQ96DU7 683 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 CNN2Q99439 309 aaKnown RBP17.67■□□□□ 0.42
HMGB3-205ENST00000455596 RTL8AQ9BWD3 113 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 ZNF69Q9UC07 566 aa17.67■□□□□ 0.42
HMGB3-205ENST00000455596 TMEM269A0A1B0GVZ9 245 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 SLC22A31A6NKX4 558 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 M0R129 80 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 TNFRSF13BO14836 293 aaPredicted RBP17.66■□□□□ 0.42
HMGB3-205ENST00000455596 ENSAO43768 121 aaKnown RBP17.66■□□□□ 0.42
HMGB3-205ENST00000455596 ZNF254O75437 659 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 CST4P01036 141 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 GYPAP02724 150 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 EGR1P18146 543 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 ACKR3P25106 362 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 EPHA2P29317 976 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 DCTDP32321 178 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 ACTG1P63261 375 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 CSNK2BP67870 215 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 EFNB1P98172 346 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 ROM1Q03395 351 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 PRDX4Q13162 271 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 TEX36Q5VZQ5 186 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 CD276Q5ZPR3 534 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 BCDIN3DQ7Z5W3 292 aaKnown RBP17.66■□□□□ 0.42
HMGB3-205ENST00000455596 FAM90A1Q86YD7 464 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 ZNF679Q8IYX0 411 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 GALNT4Q8N4A0 578 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 TMEM163Q8TC26 289 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 UPRTQ96BW1 309 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 OR8B4Q96RC9 309 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 MS4A7Q9GZW8 240 aaPredicted RBP17.66■□□□□ 0.42
HMGB3-205ENST00000455596 SEMA6AQ9H2E6 1030 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 FAM206AQ9NX38 181 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 COPS3Q9UNS2 423 aa17.66■□□□□ 0.42
HMGB3-205ENST00000455596 ZNF850A8MQ14 1090 aa17.65■□□□□ 0.42
HMGB3-205ENST00000455596 RIDAP52758 137 aaKnown RBP17.65■□□□□ 0.42
HMGB3-205ENST00000455596 AADACL4Q5VUY2 407 aa17.65■□□□□ 0.42
HMGB3-205ENST00000455596 WDR82Q6UXN9 313 aa17.65■□□□□ 0.42
HMGB3-205ENST00000455596 ZDHHC22Q8N966 263 aa17.65■□□□□ 0.42
HMGB3-205ENST00000455596 FAM81AQ8TBF8 368 aa17.65■□□□□ 0.42
HMGB3-205ENST00000455596 PIGCQ92535 297 aa17.65■□□□□ 0.42
HMGB3-205ENST00000455596 CENPNQ96H22 339 aaPredicted RBP17.65■□□□□ 0.42
HMGB3-205ENST00000455596 CIB1Q99828 191 aa17.65■□□□□ 0.42
HMGB3-205ENST00000455596 TTTY10Q9BZA0 68 aa17.65■□□□□ 0.42
HMGB3-205ENST00000455596 TLNRD1Q9H1K6 362 aa17.65■□□□□ 0.42
HMGB3-205ENST00000455596 ESM1Q9NQ30 184 aa17.65■□□□□ 0.42
HMGB3-205ENST00000455596 IKZF2Q9UKS7 526 aa17.65■□□□□ 0.42
HMGB3-205ENST00000455596 IGHV3OR15-7A0A075B7D8 119 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 A0A0U1RQV5 110 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 TMEM210A6NLX4 147 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 MUC1P15941 1255 aaPredicted RBP17.64■□□□□ 0.41
HMGB3-205ENST00000455596 CFHR2P36980 270 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 MAP2K3P46734 347 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 MICBQ29980 383 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 TUSC1Q2TAM9 212 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 ZNF829Q3KNS6 432 aaPredicted RBP17.64■□□□□ 0.41
HMGB3-205ENST00000455596 C12orf54Q6X4T0 127 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 ASRGL1Q7L266 308 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 COMMD2Q86X83 199 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 GID4Q8IVV7 300 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 ZDHHC23Q8IYP9 409 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 BCL6BQ8N143 479 aaPredicted RBP17.64■□□□□ 0.41
HMGB3-205ENST00000455596 SIGLECL1Q8N7X8 197 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 OR5P3Q8WZ94 311 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 ITFG2Q969R8 447 aa17.64■□□□□ 0.41
HMGB3-205ENST00000455596 IL4I1Q96RQ9 567 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms