RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 FAM71F1Q96KD3 344 aaPredicted RBP23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 ANKRD60Q9BZ19 345 aa23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 PPP1R3EQ9H7J1 279 aa23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 ISG20L2Q9H9L3 353 aaKnown RBP23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 CNOT2Q9NZN8 540 aaKnown RBP23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 DIMT1Q9UNQ2 313 aaKnown RBP23.64■■□□□ 1.37
SMARCC1-203ENST00000454240 LOC100289279A0A1B0GTE1 492 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 CLDN25C9JDP6 229 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 P2RY10O00398 339 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 XPNPEP2O43895 674 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 DHRS3O75911 302 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 PIPP12273 146 aaPredicted RBP23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 CCL1P22362 96 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 MYF6P23409 242 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 SLC3A1Q07837 685 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 SEMA6DQ8NFY4 1073 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 OR2G2Q8NGZ5 317 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 TMEM80Q96HE8 168 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 TMEM106BQ9NUM4 274 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 DCAF16Q9NXF7 216 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 PSORS1C1Q9UIG5 152 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 MPC1Q9Y5U8 109 aa23.63■■□□□ 1.37
SMARCC1-203ENST00000454240 ZANQ9Y493 2812 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 EFCAB10A6NFE3 127 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 MTRF1O75570 445 aaKnown RBP23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 KIR3DL2P43630 455 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 ETV1P50549 477 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 RIPPLY1Q0D2K3 151 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 HNRNPA0Q13151 305 aaKnown RBP23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 ZBTB37Q5TC79 503 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 BIVMQ86UB2 503 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 BPIFB6Q8NFQ5 453 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 OR14K1Q8NGZ2 314 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 SMR3AQ99954 134 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 PAPOLGQ9BWT3 736 aaKnown RBP23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 FRRS1LQ9P0K9 344 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 V9GYS6 101 aa23.62■■□□□ 1.37
SMARCC1-203ENST00000454240 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 IGHV3-64DA0A0J9YX35 117 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 ZNF816-ZNF321PA0A0X1KG74 233 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 IFNL4K9M1U5 179 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 HTR1AP08908 422 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 GNALP38405 381 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 CCR9P51686 369 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 NANOS3P60323 173 aaKnown RBP23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 MVKQ03426 396 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 MZT1Q08AG7 82 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 ST3GAL4Q11206 333 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 C6orf141Q5SZD1 244 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 DOK3Q7L591 496 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 MOGAT3Q86VF5 341 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 ZNF420Q8TAQ5 688 aaPredicted RBP23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 PIGCQ92535 297 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 ERGIC1Q969X5 290 aa23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 EXOSC1Q9Y3B2 195 aaKnown RBP23.61■■□□□ 1.37
SMARCC1-203ENST00000454240 ZNF850A8MQ14 1090 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 RBMXP38159 391 aaKnown RBP23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 PMELP40967 661 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 CSNK2BP67870 215 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 PRDX4Q13162 271 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 ODF4Q2M2E3 257 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 ZNF181Q2M3W8 571 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 PRAMEF6Q5VXH4 476 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 OR8S1Q8NH09 359 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 ITPKCQ96DU7 683 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 ABCB9Q9NP78 766 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 FKBP14Q9NWM8 211 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 C14orf119Q9NWQ9 140 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 PIGLQ9Y2B2 252 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 CAB39Q9Y376 341 aaPredicted RBP23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 WIPI2Q9Y4P8 454 aa23.6■■□□□ 1.37
SMARCC1-203ENST00000454240 DHRS7CA6NNS2 312 aa23.59■■□□□ 1.37
SMARCC1-203ENST00000454240 UBCP0CG48 685 aaKnown RBP23.59■■□□□ 1.37
SMARCC1-203ENST00000454240 CHN2P52757 468 aa23.59■■□□□ 1.37
SMARCC1-203ENST00000454240 MRPL28Q13084 256 aaKnown RBP23.59■■□□□ 1.37
SMARCC1-203ENST00000454240 MPPED2Q15777 294 aa23.59■■□□□ 1.37
SMARCC1-203ENST00000454240 Q8TCH9 128 aa23.59■■□□□ 1.37
SMARCC1-203ENST00000454240 RAB1CQ92928 201 aa23.59■■□□□ 1.37
SMARCC1-203ENST00000454240 TIMD4Q96H15 378 aa23.59■■□□□ 1.37
SMARCC1-203ENST00000454240 GSX1Q9H4S2 264 aaPredicted RBP23.59■■□□□ 1.37
SMARCC1-203ENST00000454240 LRP5LA4QPB2 252 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 ANXA2P2A6NMY6 339 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 TMEM178BH3BS89 294 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 WNT9BO14905 357 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 ISG15P05161 165 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 FAHP16930 419 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 MYL12AP19105 171 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 KRTAP1-1Q07627 177 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 ALKBH1Q13686 389 aaKnown RBP23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 TMEM249Q2WGJ8 235 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 AVPI1Q5T686 147 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 CCDC54Q8NEL0 328 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 HAVCR2Q8TDQ0 301 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 OR5P3Q8WZ94 311 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 CLEC2DQ9UHP7 191 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 ENPP5Q9UJA9 477 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 RAB26Q9ULW5 256 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 NPTNQ9Y639 398 aa23.58■■□□□ 1.37
SMARCC1-203ENST00000454240 A0A1B0GVI7 797 aa23.57■■□□□ 1.36
SMARCC1-203ENST00000454240 E9PI62 339 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms