RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 APOL4Q9BPW4 351 aa6.84□□□□□ -1.31
BRCC3-208ENST00000453705 C3orf14Q9HBI5 128 aa6.84□□□□□ -1.31
BRCC3-208ENST00000453705 ACER3Q9NUN7 267 aa6.84□□□□□ -1.31
BRCC3-208ENST00000453705 C1orf123Q9NWV4 160 aa6.84□□□□□ -1.31
BRCC3-208ENST00000453705 IMPAD1Q9NX62 359 aa6.84□□□□□ -1.31
BRCC3-208ENST00000453705 MUTYHQ9UIF7 546 aa6.84□□□□□ -1.31
BRCC3-208ENST00000453705 TMED3Q9Y3Q3 217 aa6.84□□□□□ -1.31
BRCC3-208ENST00000453705 FAAHO00519 579 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 GNGT2O14610 69 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 MPZL2O60487 215 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 OR2J2O76002 312 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 C1QCP02747 245 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 SPNP16150 400 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 MGMTP16455 207 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 GGT2P36268 569 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 PRKXP51817 358 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 RAB38P57729 211 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 ADAM8P78325 824 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 GAGE1Q13065 139 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 ELOCQ15369 112 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 TATDN3Q17R31 274 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 DPY19L2P2Q6ZN68 376 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 MRGPREQ86SM8 312 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 GKN2Q86XP6 184 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 HSD17B11Q8NBQ5 300 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 SLC38A9Q8NBW4 561 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 GPR32P1Q8NGA4 272 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 SNAPC3Q92966 411 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CTHRC1Q96CG8 243 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 R3HDM4Q96D70 268 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 LGALS12Q96DT0 336 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CNRIP1Q96F85 164 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 TMEM19Q96HH6 336 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 MS4A4EQ96PG1 132 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 OR2V2Q96R30 315 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 OR14A2Q96R54 314 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 DCLRE1CQ96SD1 692 aaKnown RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 DUSP15Q9H1R2 295 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 DSN1Q9H410 356 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 TMEM27Q9HBJ8 222 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 BABAM2Q9NXR7 383 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CCDC59Q9P031 241 aaKnown RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 RNF6Q9Y252 685 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CCDC88CQ9P219 2028 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 SAP18O00422 153 aaKnown RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 MPZL1O95297 269 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 NPSP0C0P6 89 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 IL7P13232 177 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 ZNF25P17030 456 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 AK4P27144 223 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 GDNFP39905 211 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CRISP3P54108 245 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 LIM2P55344 173 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 FUT5Q11128 374 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 UBE2V1Q13404 147 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 C1orf61Q13536 156 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 MAD2L1BPQ15013 274 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 DMRTC1Q5HYR2 192 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 MFSD12Q6NUT3 480 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 PRSS35Q8N3Z0 413 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CYGBQ8WWM9 190 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 TSACCQ96A04 125 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 ZNF488Q96MN9 340 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 LRRC61Q9BV99 259 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CCDC90BQ9GZT6 254 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 DPAGT1Q9H3H5 408 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 WFDC1Q9HC57 220 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 PLSCR3Q9NRY6 295 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 KBTBD11-OT1A0A1B0GTJ5 212 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 PQLC2LA1A4F0 135 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 G3V3Y1 287 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 TNFRSF11BO00300 401 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 PSPNO60542 156 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 GALR3O60755 368 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CTSVO60911 334 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 SEMA7AO75326 666 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 KHDRBS3O75525 346 aaKnown RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 WDPCPO95876 746 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CA1P00915 261 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 PIPP12273 146 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 TBXA2RP21731 343 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CXCR1P25024 350 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 PIGAP37287 484 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 RFX3P48380 749 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CD47Q08722 323 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 FAM53BQ14153 422 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 ARHGAP11BQ3KRB8 267 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 SLC16A14Q7RTX9 510 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 LRRC25Q8N386 305 aaPredicted RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 ZNF611Q8N823 705 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 C8orf31Q8N9H6 132 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 OR4E2Q8NGC2 313 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 SLC37A2Q8TED4 501 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 RAB39BQ96DA2 213 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 TTYH2Q9BSA4 534 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 TMED9Q9BVK6 235 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 SLIRPQ9GZT3 109 aaKnown RBP6.83□□□□□ -1.32
BRCC3-208ENST00000453705 PPA2Q9H2U2 334 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 SLC17A5Q9NRA2 495 aa6.83□□□□□ -1.32
BRCC3-208ENST00000453705 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms