RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 RGCCQ9H4X1 137 aa11.66□□□□□ -0.54
LYSMD3-202ENST00000453259 SAMD4AQ9UPU9 718 aaKnown RBP11.66□□□□□ -0.54
LYSMD3-202ENST00000453259 TMEM210A6NLX4 147 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 ANXA2P2A6NMY6 339 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 ZNF878C9JN71 531 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 FBXO24O75426 580 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 FAHP16930 419 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 GNALP38405 381 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 BLVRAP53004 296 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 GRB2P62993 217 aaKnown RBP11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 IKZF1Q13422 519 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 SEC23BQ15437 767 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 TAF13Q15543 124 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 TEX30Q5JUR7 227 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 ZNF788Q6ZQV5 615 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 SLC16A9Q7RTY1 509 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 CPLX4Q7Z7G2 160 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 WDR86Q86TI4 376 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 PROKR2Q8NFJ6 384 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 PPP1R35Q8TAP8 253 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 H1FXQ92522 213 aaKnown RBP11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 C7orf34Q96L11 122 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 RAB3IPQ96QF0 476 aaPredicted RBP11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 MICU1Q9BPX6 476 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 NSRP1Q9H0G5 558 aaKnown RBP11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 DNAJB11Q9UBS4 358 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 SLC25A10Q9UBX3 287 aaPredicted RBP11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 LRP12Q9Y561 859 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 MPC1Q9Y5U8 109 aa11.65□□□□□ -0.54
LYSMD3-202ENST00000453259 A0A1B0GW55 424 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 A0A1W2PPH5 198 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 A0A1W2PQ09 198 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 SIGLEC5O15389 551 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 GLCEO94923 617 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 PRB2P02812 416 aaPredicted RBP11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 DUX4L2P0CJ85 424 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 DUX4L3P0CJ86 424 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 DUX4L4P0CJ87 422 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 DUX4L5P0CJ88 424 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 DUX4L6P0CJ89 424 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 DUX4L7P0CJ90 424 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 FAM3AP98173 230 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 DBPQ10586 325 aaPredicted RBP11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 POU4F2Q12837 409 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 KLRD1Q13241 179 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 TIGD6Q17RP2 521 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 DUX4L9Q6RFH8 374 aaPredicted RBP11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 DCXRQ7Z4W1 244 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 Q8N2B8 174 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 FAM86B1Q8N7N1 296 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 PAPD5Q8NDF8 572 aaKnown RBP11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 SDR9C7Q8NEX9 313 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 ITFG2Q969R8 447 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 RCN3Q96D15 328 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 RTL8AQ9BWD3 113 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 AURKAIP1Q9NWT8 199 aaPredicted RBP11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 DUX4Q9UBX2 424 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 FOXJ3Q9UPW0 622 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 COMMD3-BMI1R4GMX3 469 aa11.64□□□□□ -0.55
LYSMD3-202ENST00000453259 NOTCH3Q9UM47 2321 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 VGLL3A8MV65 326 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 NME4O00746 187 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 CDIPTO14735 213 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 ACAA1P09110 424 aaPredicted RBP11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 ENTPD1P49961 510 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 CSNK2BP67870 215 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 C8orf82Q6P1X6 216 aaPredicted RBP11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 HACD2Q6Y1H2 254 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 FGFRL1Q8N441 504 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 LNX2Q8N448 690 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 OR52L1Q8NGH7 329 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 ANGPTL6Q8NI99 470 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 PHF21AQ96BD5 680 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 SLAMF6Q96DU3 332 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 ITPKCQ96DU7 683 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 DUS3LQ96G46 650 aaKnown RBP11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 KCTD14Q9BQ13 255 aaPredicted RBP11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 HEXA-AS1Q9H8Q6 139 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 DCAF13Q9NV06 445 aaKnown RBP11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 SIGLEC9Q9Y336 463 aa11.63□□□□□ -0.55
LYSMD3-202ENST00000453259 KMT2CQ8NEZ4 4911 aaKnown RBP11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 hCG_38984A0A1B0GV85 526 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 hCG_1809904A0A1W2PP81 198 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 A0A1W2PPE2 198 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 A0A1W2PR64 198 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 A0A1W2PRV1 198 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 H0YAE9 185 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 GMNNO75496 209 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 GADD45GO95257 159 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 VSIG10L2P0DP72 767 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 AMY2BP19961 511 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 FMO3P31513 532 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 GSSP48637 474 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 PRKXP51817 358 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 MXRA7P84157 204 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 TSPAN31Q12999 210 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 FAM76BQ5HYJ3 339 aa11.62□□□□□ -0.55
LYSMD3-202ENST00000453259 WFDC9Q8NEX5 89 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms