RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 FAM230AA0A1W2PPH8 454 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 CDC14BO60729 498 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 CYTIPO60759 359 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 CCL1P22362 96 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 CTSSP25774 331 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 MEOX1P50221 254 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 ZNF81P51508 661 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 ZNF133P52736 654 aaPredicted RBP10.3□□□□□ -0.76
VTA1-203ENST00000452973 PPIAP62937 165 aaKnown RBP10.3□□□□□ -0.76
VTA1-203ENST00000452973 RNASE10Q5GAN6 216 aaKnown RBP10.3□□□□□ -0.76
VTA1-203ENST00000452973 FOXL2NBQ6ZUU3 175 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 LIX1LQ8IVB5 337 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 MUC20Q8N307 709 aaPredicted RBP10.3□□□□□ -0.76
VTA1-203ENST00000452973 SUMF1Q8NBK3 374 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 OR8H1Q8NGG4 311 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 AQP3Q92482 292 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 PTX4Q96A99 478 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 RAB3CQ96E17 227 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 REEP6Q96HR9 211 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 FER1L6-AS2Q96M78 137 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 SCPEP1Q9HB40 452 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 SLC7A10Q9NS82 523 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 SLC23A1Q9UHI7 598 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 KCNK7Q9Y2U2 307 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 MAP1BP46821 2468 aaKnown RBP10.3□□□□□ -0.76
VTA1-203ENST00000452973 TMEM14DPA8MWL7 114 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 SULT1C2O00338 296 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 GALR2O43603 387 aaPredicted RBP10.3□□□□□ -0.76
VTA1-203ENST00000452973 CCL2P13500 99 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 ACKR3P25106 362 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 HRH1P35367 487 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 CAPZA1P52907 286 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 FOXG1P55316 489 aaPredicted RBP10.3□□□□□ -0.76
VTA1-203ENST00000452973 GNG2P59768 71 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 RAB35Q15286 201 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 C2orf68Q2NKX9 166 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 ZNF626Q68DY1 528 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 TMEM229BQ8NBD8 167 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 OR51T1Q8NGJ9 327 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 KCNG3Q8TAE7 436 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 LDAHQ9H6V9 325 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 BOD1L1Q8NFC6 3051 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 TMEM82A0PJX8 343 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 SYNGR3O43761 229 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 NOS1APO75052 506 aaPredicted RBP10.29□□□□□ -0.76
VTA1-203ENST00000452973 MTRF1O75570 445 aaKnown RBP10.29□□□□□ -0.76
VTA1-203ENST00000452973 SYNGR4O95473 234 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 PMP2P02689 132 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 SP1P08047 785 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 NAT1P18440 290 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 PTGFRP43088 359 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 TSPAN5P62079 268 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 HIST1H3AP68431 136 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 ARG2P78540 354 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 SCRN3Q0VDG4 424 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 ECH1Q13011 328 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 ARFRP1Q13795 201 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 PLAC9Q5JTB6 97 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 HIST2H3PS2Q5TEC6 136 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 HIST2H3AQ71DI3 136 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 SNAPC3Q92966 411 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 NPDC1Q9NQX5 325 aaPredicted RBP10.29□□□□□ -0.76
VTA1-203ENST00000452973 SCP2D1Q9UJQ7 156 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 PCDHGA1Q9Y5H4 931 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 CSAG2Q9Y5P2 127 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 LAMA5O15230 3695 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 PTPRZ1P23471 2315 aaPredicted RBP10.29□□□□□ -0.76
VTA1-203ENST00000452973 A0A0A6YYH2 397 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 A0A0U1RQV5 110 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 A6NJ64 397 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 GOSR2O14653 212 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 ANGPTL7O43827 346 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 OTX1P32242 354 aaPredicted RBP10.29□□□□□ -0.76
VTA1-203ENST00000452973 CLDN18P56856 261 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 BCL2A1Q16548 175 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 SLC36A1Q7Z2H8 476 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 FTMTQ8N4E7 242 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 MAFIPQ8WZ33 124 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 ARHGAP5-AS1Q96IT6 56 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 C1orf147Q96MC9 270 aaPredicted RBP10.29□□□□□ -0.76
VTA1-203ENST00000452973 TIMM10BQ9Y5J6 103 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 SVILO95425 2214 aa10.29□□□□□ -0.76
VTA1-203ENST00000452973 NKX2-8O15522 239 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 APOC1P02654 83 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 CST2P09228 141 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 FTH1P19P0C7X4 201 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 TMEM225BP0DP42 221 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 HTR2BP41595 481 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 MTCP1P56278 107 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 SEMA6DQ8NFY4 1073 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 OR52H1Q8NGJ2 320 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 GON7Q9BXV9 100 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 SLCO5A1Q9H2Y9 848 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 FAM86C1Q9NVL1 165 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 MRPS18CQ9Y3D5 142 aaKnown RBP10.28□□□□□ -0.76
VTA1-203ENST00000452973 LIPGQ9Y5X9 500 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 SPRY1O43609 319 aaPredicted RBP10.28□□□□□ -0.76
VTA1-203ENST00000452973 FARS2O95363 451 aaKnown RBP10.28□□□□□ -0.76
VTA1-203ENST00000452973 HLA-HP01893 362 aa10.28□□□□□ -0.76
VTA1-203ENST00000452973 CCL11P51671 97 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms