RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 OR3A2P47893 321 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 CNN3Q15417 329 aaKnown RBP9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 TATDN3Q17R31 274 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 SNAI3Q3KNW1 292 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 ZBTB37Q5TC79 503 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 OLFML2AQ68BL7 652 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 NUFIP2Q7Z417 695 aaKnown RBP9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF101Q8IZC7 436 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 KCNG3Q8TAE7 436 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 SPSB1Q96BD6 273 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 TECTBQ96PL2 329 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 CACNG6Q9BXT2 260 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 CLCF1Q9UBD9 225 aa9.21□□□□□ -0.93
VIPAS39-203ENST00000448935 ARHGAP21Q5T5U3 1957 aa9.21□□□□□ -0.94
VIPAS39-203ENST00000448935 DNAJC13O75165 2243 aa9.21□□□□□ -0.94
VIPAS39-203ENST00000448935 ZNF407Q9C0G0 2248 aa9.21□□□□□ -0.94
VIPAS39-203ENST00000448935 RIF1Q5UIP0 2472 aaKnown RBP9.21□□□□□ -0.94
VIPAS39-203ENST00000448935 CFAP54Q96N23 3096 aa9.21□□□□□ -0.94
VIPAS39-203ENST00000448935 AHRRA9YTQ3 701 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 E9PLN8 166 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 CNOT4O95628 575 aaKnown RBP9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 TGM6O95932 706 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 PATE4P0C8F1 98 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 PRKACBP22694 351 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 BTCP35070 178 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 ALDH3B1P43353 468 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 TGFBR3Q03167 851 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 PLA2G7Q13093 441 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 SFRP5Q5T4F7 317 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 OR2A2Q6IF42 318 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 CCDC36Q8IYA8 594 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 SSC4DQ8WTU2 575 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 UPRTQ96BW1 309 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 S100A13Q99584 98 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 SOX7Q9BT81 388 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 URM1Q9BTM9 101 aaKnown RBP9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 C1QTNF5Q9BXJ0 243 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 CST11Q9H112 138 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 HRASLSQ9HDD0 168 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 KLK11Q9UBX7 282 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 ZNF107Q9UII5 783 aaPredicted RBP9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 TMEM14DPA8MWL7 114 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 MKRN2OSH3BPM6 223 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 KDM4BO94953 1096 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 HTR3BO95264 441 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 CRYABP02511 175 aaKnown RBP9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 SERPINA5P05154 406 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 LPLP06858 475 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 GSTP1P09211 210 aaKnown RBP9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 VSIG8P0DPA2 414 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 FAHP16930 419 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 GIFP27352 417 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 RAB25P57735 213 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 QRFPP83859 136 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 KISS1Q15726 138 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 CARTPTQ16568 116 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 PCGF3Q3KNV8 242 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 RPUSD3Q6P087 351 aaKnown RBP9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 GLIPR1L1Q6UWM5 242 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 PLXDC2Q6UX71 529 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 Q6ZS92 163 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 BTN2A1Q7KYR7 527 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 OR1K1Q8NGR3 316 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 OR56B4Q8NH76 319 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 FGFBP3Q8TAT2 258 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 GPX8Q8TED1 209 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 UBASH3BQ8TF42 649 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 TRIB1Q96RU8 372 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 KCNK15Q9H427 330 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 OPA3Q9H6K4 179 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 ZNF221Q9UK13 617 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 KLK13Q9UKR3 277 aa9.2□□□□□ -0.94
VIPAS39-203ENST00000448935 IGKV1-9A0A0C4DH69 117 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 MT-ND4P03905 459 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 CD79AP11912 226 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 STOMP27105 288 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 RCVRNP35243 200 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 EIF2B2P49770 351 aaKnown RBP9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 RAB1AP62820 205 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 MALLQ13021 153 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 ARL6IP1Q15041 203 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 RSPO4Q2I0M5 234 aaPredicted RBP9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 CLVS2Q5SYC1 327 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 C9orf135Q5VTT2 229 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 MTFR2Q6P444 385 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 COLCA1Q6ZS62 124 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 FAM214BQ7L5A3 538 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 PAQR4Q8N4S7 273 aaPredicted RBP9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 CPEB3Q8NE35 698 aaKnown RBP9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 GCDHQ92947 438 aaPredicted RBP9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 SPSB4Q96A44 273 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 APOBEC3DQ96AK3 386 aaPredicted RBP9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 TMEM59Q9BXS4 323 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 NUDT15Q9NV35 164 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 ZNF224Q9NZL3 707 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 PRSS50Q9UI38 385 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 ALG5Q9Y673 324 aa9.19□□□□□ -0.94
VIPAS39-203ENST00000448935 TNRC6AQ8NDV7 1962 aaKnown RBP9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 CNOT1A5YKK6 2376 aaKnown RBP9.18□□□□□ -0.94
VIPAS39-203ENST00000448935 hCG_38984A0A1B0GV85 526 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms